RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SCYL1Q96KG9 808 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 KLHL31Q9H511 634 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 PLEKHF2Q9H8W4 249 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 SPRR3Q9UBC9 169 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 TRMT6Q9UJA5 497 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 FOXD3Q9UJU5 478 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 MED16Q9Y2X0 877 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 CLCA3PQ9Y6N3 262 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 TLN2Q9Y4G6 2542 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 CLCA1A8K7I4 914 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 CLDN4O14493 209 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 SAT1P21673 171 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 RGS4P49798 205 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 BTN3A2P78410 334 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 DHX34Q14147 1143 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 RBBP5Q15291 538 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 TOR1AIP1Q5JTV8 583 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 CATSPEREQ5SY80 951 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 TMEM132CQ8N3T6 1108 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 OR4K1Q8NGD4 311 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 EEF1AKMT1Q8WVE0 214 aa17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 AARSD1Q9BTE6 412 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-209ENST00000470006 H7C1Q1 480 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 NRDCO43847 1150 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 CD53P19397 219 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 AHRP35869 848 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 SCTRP47872 440 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 GPR143P51810 404 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 Q5PR19 223 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 LRRC8EQ6NSJ5 796 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 C4orf22Q6V702 233 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 STRA8Q7Z7C7 330 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 CLNKQ7Z7G1 428 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 ULK2Q8IYT8 1036 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 MYO1HQ8N1T3 1032 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 FBXW8Q8N3Y1 598 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 LIX1Q8N485 282 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 GOLM1Q8NBJ4 401 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 TRPV3Q8NET8 790 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 TNIP2Q8NFZ5 429 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 SGCZQ96LD1 299 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 SPNS1Q9H2V7 528 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 ADAP2Q9NPF8 381 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 SEMA4BQ9NPR2 832 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 ARL15Q9NXU5 204 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 COMMD10Q9Y6G5 202 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 HIVEP2P31629 2446 aa17.53■□□□□ 0.4
NCKIPSD-209ENST00000470006 MYOCOSA0A1B0GUC4 107 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 EIF3FO00303 357 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 IL2RAP01589 272 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 CCL3P10147 92 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 TNNI3P19429 210 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 HK2P52789 917 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 CCZ1BP86790 482 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 CCZ1P86791 482 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 FOXO1Q12778 655 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 UGT3A1Q6NUS8 523 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 OPN5Q6U736 354 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 MAATS1Q7Z4T9 603 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 NAXEQ8NCW5 288 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 SLC5A11Q8WWX8 675 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 KIAA1191Q96A73 305 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 TSNARE1Q96NA8 513 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 OR8D2Q9GZM6 311 aa17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-209ENST00000470006 A0A0G2JN53 185 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 PIGAP37287 484 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 TRPC1P48995 793 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 WNT3P56703 355 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 HSD17B7P56937 341 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 SARNPP82979 210 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 DHX9Q08211 1270 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 SP140Q13342 867 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 ATRQ13535 2644 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 HYAL4Q2M3T9 481 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 FBXL19-AS1Q494R0 122 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 DUPD1Q68J44 220 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 SEM1Q6ZVN7 128 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 SCUBE1Q8IWY4 988 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 CIARTQ8N365 385 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 FAM47BQ8NA70 645 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 DAZLQ92904 295 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 NEIL2Q969S2 332 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 HES6Q96HZ4 224 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 COX4I2Q96KJ9 171 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 JSRP1Q96MG2 331 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 SLC6A15Q9H2J7 730 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 EPB41L4BQ9H329 900 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF629Q9UEG4 869 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 MRPS33Q9Y291 106 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 DYRK1BQ9Y463 629 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 ATG4BQ9Y4P1 393 aa17.51■□□□□ 0.39
NCKIPSD-209ENST00000470006 ARID1AO14497 2285 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms