RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MICU2Q8IYU8 434 aa18■□□□□ 0.47
SMC4-209ENST00000468653 PQLC1Q8N2U9 271 aa18■□□□□ 0.47
SMC4-209ENST00000468653 DTWD1Q8N5C7 304 aa18■□□□□ 0.47
SMC4-209ENST00000468653 GOLM1Q8NBJ4 401 aa18■□□□□ 0.47
SMC4-209ENST00000468653 NRG4Q8WWG1 115 aa18■□□□□ 0.47
SMC4-209ENST00000468653 FIG4Q92562 907 aa18■□□□□ 0.47
SMC4-209ENST00000468653 DUS3LQ96G46 650 aaKnown RBP18■□□□□ 0.47
SMC4-209ENST00000468653 AHCYL2Q96HN2 611 aaKnown RBP18■□□□□ 0.47
SMC4-209ENST00000468653 NSMCE2Q96MF7 247 aa18■□□□□ 0.47
SMC4-209ENST00000468653 MAP3K3Q99759 626 aa18■□□□□ 0.47
SMC4-209ENST00000468653 EFHD1Q9BUP0 239 aa18■□□□□ 0.47
SMC4-209ENST00000468653 NLNQ9BYT8 704 aa18■□□□□ 0.47
SMC4-209ENST00000468653 TAS2R9Q9NYW1 312 aa18■□□□□ 0.47
SMC4-209ENST00000468653 EHD3Q9NZN3 535 aa18■□□□□ 0.47
SMC4-209ENST00000468653 CORO2BQ9UQ03 480 aa18■□□□□ 0.47
SMC4-209ENST00000468653 ATG4BQ9Y4P1 393 aa18■□□□□ 0.47
SMC4-209ENST00000468653 NUP214P35658 2090 aaPredicted RBP18■□□□□ 0.47
SMC4-209ENST00000468653 C1orf226A1L170 272 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 NUDT21O43809 227 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 SCELO95171 688 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 CFIP05156 583 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 GPX2P18283 190 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZNF10P21506 573 aaPredicted RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 MANFP55145 182 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 SLC14A1Q13336 389 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZC3H12BQ5HYM0 836 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 MANEAQ5SRI9 462 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 SERPINA11Q86U17 422 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMC4-209ENST00000468653 SLC35F3Q8IY50 421 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 CSNK1A1LQ8N752 337 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 PNPT1Q8TCS8 783 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZFP90Q8TF47 636 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 NCSTNQ92542 709 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 TGM7Q96PF1 710 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 FAM60AQ9NP50 221 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 C6orf203Q9P0P8 240 aaPredicted RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 AURKCQ9UQB9 309 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZDBF2Q9HCK1 2354 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 A0A1W2PR48 441 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 DHRS12A0PJE2 317 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 C1QCP02747 245 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 NTRK1P04629 796 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 SMIM10L1P0DMW3 83 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 PSMA4P25789 261 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 GZMMP51124 257 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 DEFB134Q4QY38 66 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 CLEC4FQ8N1N0 589 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 C10orf111Q8N326 155 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 CANT1Q8WVQ1 401 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 OR5P2Q8WZ92 322 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 UCN3Q969E3 161 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZBED6CLQ96FA7 236 aaPredicted RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 TCTN2Q96GX1 697 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 SMIM10Q96HG1 83 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 REXO5Q96IC2 774 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 ZC3H10Q96K80 434 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 SERINC2Q96SA4 455 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 SLC35A5Q9BS91 424 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 RPF2Q9H7B2 306 aaKnown RBP17.99■□□□□ 0.47
SMC4-209ENST00000468653 TAS2R7Q9NYW3 318 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 UTS2RQ9UKP6 389 aa17.99■□□□□ 0.47
SMC4-209ENST00000468653 GLOD5A6NK44 160 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 GLB1P16278 677 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 EPHA8P29322 1005 aaPredicted RBP17.98■□□□□ 0.47
SMC4-209ENST00000468653 CNR2P34972 360 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 SOAT1P35610 550 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 POLE2P56282 527 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 NKAIN2Q5VXU1 208 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 ZCCHC8Q6NZY4 707 aaKnown RBP17.98■□□□□ 0.47
SMC4-209ENST00000468653 ANGPTL8Q6UXH0 198 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 MCATQ8IVS2 390 aaKnown RBP17.98■□□□□ 0.47
SMC4-209ENST00000468653 SLCO4A1Q96BD0 722 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 ZDHHC12Q96GR4 267 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 FSCN3Q9NQT6 498 aa17.98■□□□□ 0.47
SMC4-209ENST00000468653 A0A1B0GTQ1 180 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 CXCR6O00574 342 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 PROM1O43490 865 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 B3GALT2O43825 422 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 KIF1CO43896 1103 aaKnown RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 PRKRAO75569 313 aaKnown RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 AIFM1O95831 613 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 ALOX12P18054 663 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 IL10P22301 178 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 CHI3L1P36222 383 aaPredicted RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 GFERP55789 205 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 PCBP4P57723 403 aaKnown RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 OR1D5P58170 312 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 DEFB110Q30KQ9 67 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 C18orf63Q68DL7 685 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 ZNF551Q7Z340 670 aaPredicted RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 GATAD2AQ86YP4 633 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 NCLNQ969V3 563 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 FAM162AQ96A26 154 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 MAPKAP1Q9BPZ7 522 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 GORASP2Q9H8Y8 452 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 SLC35C2Q9NQQ7 365 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 CCM2LQ9NUG4 571 aaPredicted RBP17.97■□□□□ 0.47
SMC4-209ENST00000468653 NLGN3Q9NZ94 848 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms