RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CASR	P41180	1078 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	GCGR	P47871	477 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	HTR6	P50406	440 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	RPS15A	P62244	130 aa	Known RBP	11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	CSNK1G2	P78368	415 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	KCNC4	Q03721	635 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	KLF10	Q13118	480 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	NCF4	Q15080	339 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	PDCD4	Q53EL6	469 aa	Known RBP	11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	TLDC1	Q6P9B6	456 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	FAM20C	Q8IXL6	584 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	MIER2	Q8N344	545 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	FNDC5	Q8NAU1	212 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	HUS1B	Q8NHY5	278 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	PROKR1	Q8TCW9	393 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	QRFPR	Q96P65	431 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	GBP5	Q96PP8	586 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	C17orf62	Q9BQA9	187 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	DPH7	Q9BTV6	452 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ACAT2	Q9BWD1	397 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ACPT	Q9BZG2	426 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	TRIM4	Q9C037	500 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	BRINP2	Q9C0B6	783 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	CLMP	Q9H6B4	373 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ENAM	Q9NRM1	1142 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	AIG1	Q9NVV5	245 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ZIM2	Q9NZV7	527 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	TAGLN3	Q9UI15	199 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	SRPK3	Q9UPE1	567 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ATP6AP2	A0A1C7CYW4	349 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	OR2A25	A4D2G3	310 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663		C9J4A7	227 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663		H7BY64	318 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PRMT3	O60678	531 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	SEC22B	O75396	215 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ATP6AP2	O75787	350 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	KLF7	O75840	302 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	DNAJB5	O75953	348 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	UBOX5	O94941	541 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	UNC5C	O95185	931 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	SPTB	P11277	2137 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ESRRA	P11474	423 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PCNA	P12004	261 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	DDX5	P17844	614 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	VARS	P26640	1264 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	TSFM	P43897	325 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ASMT	P46597	345 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	SCTR	P47872	440 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	TLE1	Q04724	770 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	TGM3	Q08188	693 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ACSM2A	Q08AH3	577 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	KLRB1	Q12918	225 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	STX5	Q13190	355 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	KIAA0040	Q15053	153 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	TMEM35A	Q53FP2	167 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	FAM69B	Q5VUD6	431 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ACSM2B	Q68CK6	577 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	FCRL6	Q6DN72	434 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	GALNT18	Q6P9A2	607 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PAGE2	Q7Z2X7	111 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	MCAT	Q8IVS2	390 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ZNF655	Q8N720	491 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	OR2T11	Q8NH01	316 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	FCRL1	Q96LA6	429 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PPP1R36	Q96LQ0	422 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PRAP1	Q96NZ9	151 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	ING2	Q9H160	280 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	C1orf21	Q9H246	121 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	DMRT3	Q9NQL9	472 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	NDE1	Q9NXR1	346 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	KLHL20	Q9Y2M5	609 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	COPG1	Q9Y678	874 aa	Known RBP	11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	TENM4	Q6N022	2769 aa		11.43	□□□□□ -0.58
CTNS-205	ENST00000467663	URAD	A6NGE7	173 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	ARGFX	A6NJG6	315 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	BBIP1	A8MTZ0	92 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	MAGEB17	A8MXT2	336 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	PSMD12	O00232	456 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	TXNDC9	O14530	226 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	CD63	P08962	238 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	PSMB5	P28074	263 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	RPL3	P39023	403 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	GRIA3	P42263	894 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	CLNS1A	P54105	237 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	DCD	P81605	110 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	PWP1	Q13610	501 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	RBBP5	Q15291	538 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	DPY19L1	Q2PZI1	675 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	SGO1	Q5FBB7	561 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	COQ5	Q5HYK3	327 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	DEPDC1	Q5TB30	811 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	C1orf189	Q5VU69	101 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	CPZ	Q66K79	652 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	FIGLA	Q6QHK4	219 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	ASB18	Q6ZVZ8	466 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms