RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ATG14Q6ZNE5 492 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 RNF165Q6ZSG1 346 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 LANCL3Q6ZV70 420 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 NUDT13Q86X67 352 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 LSM14AQ8ND56 463 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 TMEM52Q8NDY8 209 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 SELENOMQ8WWX9 145 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 TSLPQ969D9 159 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 PKNOX2Q96KN3 472 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 HBEGFQ99075 208 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 WDR77Q9BQA1 342 aaPredicted RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 YIPF2Q9BWQ6 316 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 ACPTQ9BZG2 426 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 ZNF700Q9H0M5 742 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 ADNPQ9H2P0 1102 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 DDX31Q9H8H2 851 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 MID1IP1Q9NPA3 183 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 MMACHCQ9Y4U1 282 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 MED13Q9UHV7 2174 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 TCRBV16S1A1N1A0A5B0 115 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 TMEM120BA0PK00 339 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 OR2W5A6NFC9 320 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 FAM227AF5H4B4 570 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 TGFBR3LH3BV60 316 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 PSMD12O00232 456 aaPredicted RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 PEX12O00623 359 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 TMPRSS11DO60235 418 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 CDC123O75794 336 aaPredicted RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 DNAJB5O75953 348 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 SASH3O75995 380 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 HPP00738 406 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 CHRNGP07510 517 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 FAM87AP0C7U9 286 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 CHN1P15882 459 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 HMOX2P30519 316 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 RRADP55042 308 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 HNRNPH2P55795 449 aaKnown RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 SOX8P57073 446 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 TNFRSF17Q02223 184 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 KCNAB2Q13303 367 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 ABRAXAS2Q15018 415 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 AP5B1Q2VPB7 878 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 SGO1Q5FBB7 561 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 KANK2Q63ZY3 851 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 ZCCHC23Q6ZST2 131 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 HDXQ7Z353 690 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 COMMD6Q7Z4G1 85 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 ANKRD37Q7Z713 158 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 CUZD1Q86UP6 607 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 ZNF595Q8IYB9 648 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 METTL4Q8N3J2 472 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 EXD3Q8N9H8 876 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 FAM47BQ8NA70 645 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 PLPP5Q8NEB5 264 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 METTL6Q8TCB7 284 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 ARL8AQ96BM9 186 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 C8orf44Q96CB5 159 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 C11orf24Q96F05 449 aaPredicted RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 CNDP1Q96KN2 507 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 FER1L6-AS2Q96M78 137 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 MAPKAP1Q9BPZ7 522 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 ING2Q9H160 280 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 MLXIPLQ9NP71 852 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 PRDM9Q9NQV7 894 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 LYARQ9NX58 379 aaKnown RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 ADAM29Q9UKF5 820 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 SLC12A4Q9UP95 1085 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 TIMM22Q9Y584 194 aa10.39□□□□□ -0.75
MSH5-212ENST00000467319 PCDHGA9Q9Y5G4 932 aaKnown RBP10.39□□□□□ -0.75
MSH5-212ENST00000467319 BLACEA4D250 179 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 NPIPB8E9PQR5 432 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 MASP2O00187 686 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 ULK1O75385 1050 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 SERPINE1P05121 402 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 FGF4P08620 206 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 MAOAP21397 527 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 TPP2P29144 1249 aaPredicted RBP10.38□□□□□ -0.75
MSH5-212ENST00000467319 HSD17B7P56937 341 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 WDR4P57081 412 aaKnown RBP10.38□□□□□ -0.75
MSH5-212ENST00000467319 EEF1A2Q05639 463 aaKnown RBP10.38□□□□□ -0.75
MSH5-212ENST00000467319 Q0VFX4 171 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 TTMPQ5BVD1 217 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 ARL13AQ5H913 290 aaPredicted RBP10.38□□□□□ -0.75
MSH5-212ENST00000467319 TRIM46Q7Z4K8 759 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
MSH5-212ENST00000467319 VPS50Q96JG6 964 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 ATP6V1G3Q96LB4 118 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 IMMP1LQ96LU5 166 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 ZNF446Q9NWS9 450 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 VPS29Q9UBQ0 182 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 PHF11Q9UIL8 331 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 ATG4BQ9Y4P1 393 aa10.38□□□□□ -0.75
MSH5-212ENST00000467319 CCL27Q9Y4X3 112 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms