RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 LAX1Q8IWV1 398 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 RGL4Q8IZJ4 473 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 LIX1Q8N485 282 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 STX19Q8N4C7 294 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 DNAJC22Q8N4W6 341 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF366Q8N895 744 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 GGHQ92820 318 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 HEBP1Q9NRV9 189 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 NEUROG3Q9Y4Z2 214 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 TNPO3Q9Y5L0 923 aaKnown RBP17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 FAM25EA8MYX2 175 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 MYO1GB0I1T2 1018 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ULK1O75385 1050 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 C1QCP02747 245 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CSF3P09919 207 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 KELP23276 732 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 DNAJA1P31689 397 aaKnown RBP17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 NRIP1P48552 1158 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 GBX2P52951 348 aaPredicted RBP17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 HOXC5Q00444 222 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 NPRL3Q12980 569 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 LAPTM4AQ15012 233 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ATP13A5Q4VNC0 1218 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CARD16Q5EG05 197 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CLLU1Q5K131 121 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 GPRC6AQ5T6X5 926 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 LRRC66Q68CR7 880 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 OR2T5Q6IEZ7 315 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 C10orf111Q8N326 155 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 OR2T29Q8NH02 315 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ASIC4Q96FT7 647 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CD244Q9BZW8 370 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 A0A1W2PRU2 124 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 FPR1P21462 350 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 CD9P21926 228 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 DGKAP23743 735 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 EPHA2P29317 976 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 CCT3P49368 545 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 RGS4P49798 205 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 AP1S1P61966 158 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 DEFB103AP81534 67 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 POU4F3Q15319 338 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 CRTC1Q6UUV9 634 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 ULK4Q96C45 1275 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 IL1RAPQ9NPH3 570 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 MCUBQ9NWR8 336 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 PDP1Q9P0J1 537 aaPredicted RBP17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 NOSIPQ9Y314 301 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 PTHP01270 115 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 MAGEA2P43356 314 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 BTN1A1Q13410 526 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 GLYR1Q49A26 553 aaPredicted RBP17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 LCN1P1Q5VSP4 162 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 Q6ZNB5 142 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 ATG16L2Q8NAA4 619 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 BTN2A2Q8WVV5 523 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 TRMT2BQ96GJ1 504 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 ASPNQ9BXN1 380 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 TMEM168Q9H0V1 697 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 IFT46Q9NQC8 304 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 ING4Q9UNL4 249 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 OARD1Q9Y530 152 aa17.3■□□□□ 0.36
SNAPC3-205ENST00000467062 TPMTP51580 245 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 B4GALNT1Q00973 533 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 TLE2Q04725 743 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 EIF4HQ15056 248 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ZMYND11Q15326 602 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 MZT2BQ6NZ67 158 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 C19orf48Q6RUI8 117 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 C9orf43Q8TAL5 461 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF296Q8WUU4 475 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ST8SIA4Q92187 359 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 USB1Q9BQ65 265 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 MCCC2Q9HCC0 563 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 MRPL17Q9NRX2 175 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC25A37Q9NYZ2 338 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 HECAQ9UBI9 543 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 CCL26Q9Y258 94 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 DOCK6Q96HP0 2047 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 LRATO95237 230 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 IFNA7P01567 189 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 RAF1P04049 648 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 RRASP10301 218 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 LHCGRP22888 699 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 F8A1P23610 371 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 CCR7P32248 378 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 MAP2K3P46734 347 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 KIAA0040Q15053 153 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 MAPKAPK3Q16644 382 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 COL28A1Q2UY09 1125 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 PTCHD3Q3KNS1 767 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 TPGS2Q68CL5 300 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ANKRD54Q6NXT1 300 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 KLHL17Q6TDP4 642 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 VRK3Q8IV63 474 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 TAGAPQ8N103 731 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC13A3Q8WWT9 602 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms