RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TNNT3P45378 269 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 RGRP47804 291 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 RGS7P49802 495 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 GMPSP49915 693 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 RAB28P51157 221 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 MFAP3P55082 362 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 BACE1P56817 501 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 SULT2A1Q06520 285 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 IL10RBQ08334 325 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 LRRC37A5PQ49AS3 106 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 HERC4Q5GLZ8 1057 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 KRBOX4Q5JUW0 171 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 C9orf129Q5T035 196 aaKnown RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 TCEAL6Q6IPX3 200 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF770Q6IQ21 691 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 KLHL10Q6JEL2 608 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 ARMCX5Q6P1M9 558 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 IGFL2Q6UWQ7 119 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 MACC1Q6ZN28 852 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF600Q6ZNG1 722 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 DNAJB7Q7Z6W7 309 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 SNX32Q86XE0 403 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 PRR22Q8IZ63 422 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 OR6J1Q8NGC5 347 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 OR6F1Q8NGZ6 308 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 EXT2Q93063 718 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 SECISBP2LQ93073 1101 aaKnown RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 NTNG2Q96CW9 530 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 HDAC11Q96DB2 347 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 PGAP3Q96FM1 320 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 CFAP57Q96MR6 1250 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 JAKMIP1Q96N16 626 aaKnown RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 SIGLEC12Q96PQ1 595 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 MCCC1Q96RQ3 725 aaPredicted RBP1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 FN3KQ9H479 309 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 GRPEL1Q9HAV7 217 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 KCNK13Q9HB14 408 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 SLC12A6Q9UHW9 1150 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 ANAPC5Q9UJX4 755 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 NSG2Q9Y328 171 aa1.94□□□□□ -2.1
GTF3C3-209ENST00000466862 TEX48A0A1B0GUV7 120 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ZSCAN5CA6NGD5 496 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF724A8MTY0 619 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 PRSS46E5RG02 174 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 TBX10O75333 385 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 SCG2P13521 617 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 CPT2P23786 658 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 CTNNA2P26232 953 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 OAS2P29728 719 aaKnown RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 SPRP35270 261 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 OR3A3P47888 321 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF41P51814 821 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 IST1P53990 364 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 CAMK2DQ13557 499 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 COG2Q14746 738 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ECSCRQ19T08 205 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 KRT80Q6KB66 452 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 NHLRC1Q6VVB1 395 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 Q71RC1 249 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 NRARPQ7Z6K4 114 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 OR8H3Q8N146 312 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 U2AF1L4Q8WU68 220 aaKnown RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 LIPHQ8WWY8 451 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 RMDN1Q96DB5 314 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 VMP1Q96GC9 406 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ANKRD2Q9GZV1 360 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ASB8Q9H765 288 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF275Q9NSD4 429 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 ARGLU1Q9NWB6 273 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 C5AR2Q9P296 337 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 DBF4Q9UBU7 674 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 NIP7Q9Y221 180 aaKnown RBP eCLIP1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 CPQQ9Y646 472 aa1.93□□□□□ -2.1
GTF3C3-209ENST00000466862 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 URADA6NGE7 173 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 TCP10L2B9ZVM9 353 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 H0Y626 953 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CCDC188H7C350 402 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 PGRMC2O15173 223 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 TGDSO95455 350 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CCDC175P0C221 793 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF32P17041 273 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CDX1P47902 265 aaPredicted RBP1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 RPS27AP62979 156 aaKnown RBP1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 RBP5P82980 135 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 MZT1Q08AG7 82 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 TFCP2Q12800 502 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 BFSP1Q12934 665 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 FASTKQ14296 549 aaKnown RBP1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF542PQ5EBM4 170 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZRANB3Q5FWF4 1079 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 PET117Q6UWS5 81 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CHST3Q7LGC8 479 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CCDC186Q7Z3E2 898 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ADGRD2Q7Z7M1 963 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 IQCA1Q86XH1 822 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 FAM219AQ8IW50 185 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF491Q8N8L2 437 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms