RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 TAPBPO15533 448 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 DYRK3O43781 588 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 TNFRSF8P28908 595 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 TRHRP34981 398 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-206ENST00000466591 ARL1P40616 181 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-206ENST00000466591 RFC3P40938 356 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 RAP1GDS1P52306 607 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 LIM2P55344 173 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 PHEXP78562 749 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 HSF1Q00613 529 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 ELAVL1Q15717 326 aaKnown RBP16.35■□□□□ 0.21
COL7A1-206ENST00000466591 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-206ENST00000466591 AP5B1Q2VPB7 878 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 CHSY3Q70JA7 882 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 KIAA1191Q96A73 305 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 MRRFQ96E11 262 aaKnown RBP16.35■□□□□ 0.21
COL7A1-206ENST00000466591 F2RL3Q96RI0 385 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 PHACTR1Q9C0D0 580 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 HPF1Q9NWY4 346 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 COQ3Q9NZJ6 369 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 NUDT4Q9NZJ9 180 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 COPS7AQ9UBW8 275 aa16.35■□□□□ 0.21
COL7A1-206ENST00000466591 FAM159BA6NKW6 160 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 ACOT7O00154 380 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 TP73O15350 636 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 PEX1O43933 1283 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 SH3BGRLO75368 114 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 TUBB4AP04350 444 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 COX7A2P14406 83 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 TFEBP19484 476 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 CRABP2P29373 138 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 GGT5P36269 586 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 SSR2P43308 183 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 MAGEA4P43358 317 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 GPR85P60893 370 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 DDX39BQ13838 428 aaKnown RBP16.34■□□□□ 0.21
COL7A1-206ENST00000466591 KBTBD12Q3ZCT8 623 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 MED27Q6P2C8 311 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 ABHD17CQ6PCB6 329 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 HSDL2Q6YN16 418 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 GDF7Q7Z4P5 450 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 PDPRQ8NCN5 879 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
COL7A1-206ENST00000466591 OR14A16Q8NHC5 309 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 CD244Q9BZW8 370 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 OR8D2Q9GZM6 311 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 KCMF1Q9P0J7 381 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 PPT2Q9UMR5 302 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 DAPP1Q9UN19 280 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 YARS2Q9Y2Z4 477 aaKnown RBP16.34■□□□□ 0.21
COL7A1-206ENST00000466591 MEMO1Q9Y316 297 aa16.34■□□□□ 0.21
COL7A1-206ENST00000466591 CACNA1DQ01668 2161 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 MYOCOSA0A1B0GUC4 107 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 SYCE1LA8MT33 242 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 CTNSO60931 367 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 TPOP07202 933 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 GFAPP14136 432 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 GRNP28799 593 aaKnown RBP16.33■□□□□ 0.2
COL7A1-206ENST00000466591 PPP2R1BP30154 601 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 SERPINB1P30740 379 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 PTGS2P35354 604 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 NAB1Q13506 487 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 SERTAD2Q14140 314 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.2
COL7A1-206ENST00000466591 KLC3Q6P597 504 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 PAOXQ6QHF9 649 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 TICAM1Q8IUC6 712 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 SULF2Q8IWU5 870 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 SCUBE1Q8IWY4 988 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 APCDD1LQ8NCL9 501 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 FBF1Q8TES7 1133 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 CA5BP1Q8WTZ4 195 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 CSF3RQ99062 836 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 TBCDQ9BTW9 1192 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 ALOXE3Q9BYJ1 711 aa16.33■□□□□ 0.2
COL7A1-206ENST00000466591 C17orf105B2RV13 164 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 K7EPI3 171 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 HS6ST1O60243 411 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 OR2J2O76002 312 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 CLDN14O95500 239 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 TGFB1P01137 390 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 LTA4HP09960 611 aaKnown RBP16.32■□□□□ 0.2
COL7A1-206ENST00000466591 EPB42P16452 691 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 CPN2P22792 545 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 PHBP35232 272 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 PTGER4P35408 488 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 HNRNPFP52597 415 aaKnown RBP16.32■□□□□ 0.2
COL7A1-206ENST00000466591 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
COL7A1-206ENST00000466591 TMEM35AQ53FP2 167 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 ADNP2Q6IQ32 1131 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 IL20RBQ6UXL0 311 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 C3P1Q6ZMU1 363 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 CYS1Q717R9 158 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 CMC1Q7Z7K0 106 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 GPALPP1Q8IXQ4 340 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 C7orf57Q8NEG2 295 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 OR5L2Q8NGL0 311 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 AICDAQ9GZX7 198 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 LYRM4Q9HD34 91 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms