RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HDDC3Q8N4P3 179 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 ADAD2Q8NCV1 583 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR10G7Q8NGN6 311 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR5M9Q8NGP3 310 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 SLC13A3Q8WWT9 602 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 SMPDL3AQ92484 453 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 TMEM186Q96B77 213 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 CDHR1Q96JP9 859 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 TMEM237Q96Q45 408 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 SPAG8Q99932 426 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 ABCG8Q9H221 673 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF665Q9H7R5 613 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 B3GAT2Q9NPZ5 323 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 PIGVQ9NUD9 493 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZDHHC18Q9NUE0 388 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 BARHL2Q9NY43 387 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 TMEM181Q9P2C4 612 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 KCNN3Q9UGI6 736 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 FETUBQ9UGM5 382 aa3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 ERRFI1Q9UJM3 462 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-211ENST00000466538 MPTX1A8MV57 137 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 TLR4O00206 839 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 LINC01565O15544 149 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ECE2O60344 883 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 NME2P1O60361 137 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ATP6V1G1O75348 118 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 STBD1O95210 358 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 CXCL14O95715 111 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ANGPTL1O95841 491 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 CHRNGP07510 517 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 NUDT17P0C025 328 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 RNF224P0DH78 156 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 GAP43P17677 238 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 PRKACGP22612 351 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 OPRL1P41146 370 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 CRIP2P52943 208 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 SSTP61278 116 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 GALK2Q01415 458 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 DHODHQ02127 395 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 HSPA14Q0VDF9 509 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 PPP1R8Q12972 351 aaKnown RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZFP69Q49AA0 526 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 RFTN2Q52LD8 501 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 HERC4Q5GLZ8 1057 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 TOR1AIP1Q5JTV8 583 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 C1orf189Q5VU69 101 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 CES4AQ5XG92 561 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 CAPN13Q6MZZ7 669 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 DLEU7Q6UYE1 221 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 Q6ZRP5 223 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF614Q8N883 585 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 MRPL43Q8N983 215 aaKnown RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 NEK11Q8NG66 645 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 RPLP0P6Q8NHW5 317 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 GOLGA5Q8TBA6 731 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 DTD2Q96FN9 168 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ERGIC2Q96RQ1 377 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 DGCR6LQ9BY27 220 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 DDX47Q9H0S4 455 aaKnown RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 C3orf14Q9HBI5 128 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 GPN1Q9HCN4 374 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 HOMER3Q9NSC5 361 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 TXLNGQ9NUQ3 528 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 KLK11Q9UBX7 282 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 ODF2LQ9ULJ1 636 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 PLCL2Q9UPR0 1127 aa3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 EXOGQ9Y2C4 368 aaKnown RBP3.73□□□□□ -1.81
CDC42BPA-211ENST00000466538 A0A087WYN8 130 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 MACROD2A1Z1Q3 448 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 SRRM4A7MD48 611 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 KPNA7A9QM74 516 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 INPP4BO15327 924 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 SIGLEC5O15389 551 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 TNFSF12O43508 249 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 TLX2O43763 284 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 LRCH4O75427 683 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 GMNNO75496 209 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 TXNDC12O95881 172 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 ALPPP05187 535 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 RPLP0P05388 317 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 APRTP07741 180 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 ALPPL2P10696 532 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 B4GALT1P15291 398 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 RPL9P32969 192 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 MMP12P39900 470 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 SLC6A12P48065 614 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 FHITP49789 147 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 LUMP51884 338 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 HNRNPFP52597 415 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 BACE1P56817 501 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 GSCP56915 257 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 BTG1P62324 171 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CDKL1Q00532 357 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 TMEM187Q14656 261 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 PDK1Q15118 436 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR1C1Q15619 314 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 MPPE1Q53F39 396 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 BSPRYQ5W0U4 402 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 KIF6Q6ZMV9 814 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms