RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 EPN2O95208 641 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 NCK1P16333 377 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 SLC2A7Q6PXP3 512 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 FIGLAQ6QHK4 219 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 LIX1Q8N485 282 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 C1orf52Q8N6N3 182 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CNDP2Q96KP4 475 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 TMEM74Q96NL1 305 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 RDH12Q96NR8 316 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CHID1Q9BWS9 393 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 AICDAQ9GZX7 198 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 RHBGQ9H310 441 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 BRF2Q9HAW0 419 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 SNX7Q9UNH6 387 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 ENTPD2Q9Y5L3 495 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 WDFY3Q8IZQ1 3526 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 LILRA5A6NI73 299 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 ANKRD28O15084 1053 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 NUDT21O43809 227 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 PRSS23O95084 383 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 HPRP00739 348 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 GNAO1P09471 354 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 RAP2AP10114 183 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 BCKDHAP12694 445 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 ST6GAL1P15907 406 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 HOXB6P17509 224 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CXCR2P25025 360 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 PIK3CBP42338 1070 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CAPZBP47756 277 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CDH15P55291 814 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 RAE1P78406 368 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 ADARB1P78563 741 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CFHR1Q03591 330 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 FAM98BQ52LJ0 330 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CYBRD1Q53TN4 286 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 GUSBP11Q6P575 273 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 USP53Q70EK8 1073 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 GLB1L3Q8NCI6 653 aaPredicted RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 OR4C6Q8NH72 309 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 WDR48Q8TAF3 677 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 FAM81AQ8TBF8 368 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CREB3L4Q8TEY5 395 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 UBE2E3Q969T4 207 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 C11orf24Q96F05 449 aaPredicted RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 CMTM7Q96FZ5 175 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 MAP3K3Q99759 626 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 TUBA1CQ9BQE3 449 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 KLHL31Q9H511 634 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 UCK1Q9HA47 277 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 FAM60AQ9NP50 221 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 KLHL3Q9UH77 587 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 POMT2Q9UKY4 750 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 EIF3LQ9Y262 564 aaKnown RBP17.71■□□□□ 0.43
CAPN3-209ENST00000466222 BTBD3Q9Y2F9 522 aa17.71■□□□□ 0.43
CAPN3-209ENST00000466222 A0A0J9YVX5 310 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TRBC2A0A5B9 178 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 OR2A25A4D2G3 310 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CAPN5O15484 640 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-209ENST00000466222 ZW10O43264 779 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 KCNH1O95259 989 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CCNDBP1O95273 360 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CTSBP07858 339 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 GLB1P16278 677 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 GGT1P19440 569 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CCNYL2Q5T2Q4 361 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 FRMPD2BQ6IN97 320 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 ARMC6Q6NXE6 501 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 NOXRED1Q6NXP6 359 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 ZCCHC8Q6NZY4 707 aaKnown RBP17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CROCCP3Q8IVE0 287 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 KRTCAP2Q8N6L1 136 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CHTF18Q8WVB6 975 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TGM7Q96PF1 710 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 UGT2B28Q9BY64 529 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 RXFP3Q9NSD7 469 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TMEM9Q9P0T7 183 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CACNA1EQ15878 2313 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 LOC105369274A0A096LPK9 316 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 A0A0G2JN53 185 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 LOC102723532A0A0G2JNH3 316 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 LNP1A1A4G5 178 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TNFSF14O43557 240 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 B3GALT4O96024 378 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 ALBP02768 609 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 PCSK2P16519 638 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 PRPH2P23942 346 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 GRK3P35626 688 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 OR4D2P58180 307 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 HYAL2Q12891 473 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 EPS8Q12929 822 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 SLC5A12Q1EHB4 618 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 PLA2G2CQ5R387 149 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 RABEPKQ7Z6M1 372 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 GPR180Q86V85 440 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 CLVS1Q8IUQ0 354 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-209ENST00000466222 OR4N4Q8N0Y3 316 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms