RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SYT16Q17RD7 645 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 NKAIN1Q4KMZ8 207 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 CCNYL2Q5T2Q4 361 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 NXNQ6DKJ4 435 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 FAM71E1Q6IPT2 247 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 LCN10Q6JVE6 187 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 FAM198BQ6UWH4 519 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 TIPARPQ7Z3E1 657 aaKnown RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 PARP9Q8IXQ6 854 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 LIX1Q8N485 282 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 C16orf78Q8WTQ4 265 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 TM4SF18Q96CE8 201 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 CLIP3Q96DZ5 547 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MMABQ96EY8 250 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 SLC45A3Q96JT2 553 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 EGLN2Q96KS0 407 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MARK4Q96L34 752 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 CATSPER2Q96P56 530 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 CSF3RQ99062 836 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 AKIRIN1Q9H9L7 192 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 ZNF304Q9HCX3 659 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 LYARQ9NX58 379 aaKnown RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 TEX10Q9NXF1 929 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 HCN3Q9P1Z3 774 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 NDOR1Q9UHB4 597 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 CDC14AQ9UNH5 594 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 EXO1Q9UQ84 846 aaKnown RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 MAP4K5Q9Y4K4 846 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 ATG4BQ9Y4P1 393 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 GPR45Q9Y5Y3 372 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MAU2Q9Y6X3 613 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 GNG14A0A1W2PPG7 69 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 A0A1W2PR48 441 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 CYR61O00622 381 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 UBDO15205 165 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 PROM1O43490 865 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 CHST10O43529 356 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 CNOT3O75175 753 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 MYO1DO94832 1006 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 AIFM1O95831 613 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 IL3P08700 152 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 G6PDP11413 515 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 FBLP22087 321 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 ALAS2P22557 587 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 SLC5A2P31639 672 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 GSTM5P46439 218 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 ATP4BP51164 291 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 MAPK12P53778 367 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 RAB38P57729 211 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 TAS2R50P59544 299 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 DCDP81605 110 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 TNFRSF17Q02223 184 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 KLC1Q07866 573 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 ABHD18Q0P651 414 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 MAP7Q14244 749 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 SLC9A5Q14940 896 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 ARHGAP40Q5TG30 622 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 METTL21CQ5VZV1 264 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 CYP20A1Q6UW02 462 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 ZC3H7AQ8IWR0 971 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 RIMKLAQ8IXN7 391 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 MMP21Q8N119 569 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 ANKS4BQ8N8V4 417 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 GALNT6Q8NCL4 622 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 TMEM52Q8NDY8 209 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 TSSK3Q96PN8 268 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 DPH2Q9BQC3 489 aaPredicted RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 SCNM1Q9BWG6 230 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 SLC26A1Q9H2B4 701 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 SDR39U1Q9NRG7 319 aaPredicted RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 LANCL2Q9NS86 450 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 HEY2Q9UBP5 337 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 CTSFQ9UBX1 484 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 PHF11Q9UIL8 331 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 EIF3LQ9Y262 564 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 WBP11Q9Y2W2 641 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 NEUROG3Q9Y4Z2 214 aa10.52□□□□□ -0.73
VCP-204ENST00000466100 COPG1Q9Y678 874 aaKnown RBP10.52□□□□□ -0.73
VCP-204ENST00000466100 ARHGAP10A1A4S6 786 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 VSTM2BA6NLU5 285 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 TERTO14746 1132 aaKnown RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 BRINP1O60477 761 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 PRKRAO75569 313 aaKnown RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 RNH1P13489 461 aaKnown RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 IDO1P14902 403 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 SPINK2P20155 84 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 GPX3P22352 226 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 JAK1P23458 1154 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 CD82P27701 267 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 ASMTP46597 345 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 ZFP36L2P47974 494 aaKnown RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 HNRNPFP52597 415 aaKnown RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 EFNA3P52797 238 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 CLDN8P56748 225 aa10.51□□□□□ -0.73
VCP-204ENST00000466100 IRX1P78414 480 aaPredicted RBP10.51□□□□□ -0.73
VCP-204ENST00000466100 SHC2P98077 582 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms