RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ARHGEF39Q8N4T4 335 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 DPP10Q8N608 796 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 LRRC58Q96CX6 371 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 MS4A6EQ96DS6 147 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 REXO4Q9GZR2 422 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 FANCEQ9HB96 536 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 PACSIN3Q9UKS6 424 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 A0A1W2PNU3 283 aaPredicted RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 PRORSD1PA6NEY8 169 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 HSD17B1P14061 328 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 ITGA1P56199 1179 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 TLR1Q15399 786 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 IMPG1Q17R60 797 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 TMEM35AQ53FP2 167 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 PRAMEF17Q5VTA0 474 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 IRAK1BP1Q5VVH5 260 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 TMEM214Q6NUQ4 689 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 CYP20A1Q6UW02 462 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 RNF111Q6ZNA4 994 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 BHLHE22Q8NFJ8 381 aaPredicted RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 DUS3LQ96G46 650 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 TEX37Q96LM6 180 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF184Q99676 751 aaPredicted RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 C1orf50Q9BV19 199 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 NLNQ9BYT8 704 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 APMAPQ9HDC9 416 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 FBXO8Q9NRD0 319 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 IRAK4Q9NWZ3 460 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 RARRES3Q9UL19 164 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 MRPS2Q9Y399 296 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 LOXL2Q9Y4K0 774 aa16.06■□□□□ 0.16
EXOSC3-203ENST00000465229 C15orf38-AP3S2A0A0A6YYH1 394 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 FAM149AA5PLN7 773 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 B4E171 279 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 C4orf51C9J302 202 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 PEX1O43933 1283 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 RSL1D1O76021 490 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 MED26O95402 600 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 C8BP07358 591 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SMIM10L1P0DMW3 83 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ACPPP15309 386 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 TSPAN7P41732 249 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC7A2P52569 658 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 STXBP1P61764 594 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 IL11RAQ14626 422 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 GRM7Q14831 915 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 RFTN2Q52LD8 501 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 IL23RQ5VWK5 629 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ARPINQ7Z6K5 226 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 BPHLQ86WA6 291 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 MARCH9Q86YJ5 346 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 GPR135Q8IZ08 494 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 FAM9CQ8IZT9 166 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 RNF148Q8N7C7 305 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 GLB1L3Q8NCI6 653 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 HIPK4Q8NE63 616 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 OR2L5Q8NG80 312 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 OR8K5Q8NH50 307 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 UTP15Q8TED0 518 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 APIPQ96GX9 242 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SMIM10Q96HG1 83 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 WDFY3Q8IZQ1 3526 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 CCDC187A0A096LP49 1063 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 HYKKA2RU49 373 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 PMS2P1A4D2B8 440 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ASPDHA6ND91 283 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 POLR1CO15160 346 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ERI3O43414 337 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SEMA3DO95025 777 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF888P0CJ79 500 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 G6PDP11413 515 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 FGF5P12034 268 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ITIH1P19827 911 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 IL12AP29459 219 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 GCGRP47871 477 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ERFP50548 548 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 PLA2G16P53816 162 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 BNIP2Q12982 314 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 EIF3IQ13347 325 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 KIAA0040Q15053 153 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ABHD17CQ6PCB6 329 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 TMPRSS7Q7RTY8 843 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC15A3Q8IY34 581 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 PQLC1Q8N2U9 271 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 GOLM1Q8NBJ4 401 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 CHTF18Q8WVB6 975 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 CTRCQ99895 268 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 MUC13Q9H3R2 512 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 ACTL8Q9H568 366 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 LRTM1Q9HBL6 345 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 LHX9Q9NQ69 397 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 C1orf109Q9NX04 203 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 LRCH1Q9Y2L9 728 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC22A7Q9Y694 548 aa16.05■□□□□ 0.16
EXOSC3-203ENST00000465229 URADA6NGE7 173 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms