RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SGO1Q5FBB7 561 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 MED25Q71SY5 747 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 TRIM46Q7Z4K8 759 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 HPS6Q86YV9 775 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 PARP9Q8IXQ6 854 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 DDIASQ8IXT1 998 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 TMEM102Q8N9M5 508 aaPredicted RBP16.5■□□□□ 0.23
CPSF4-209ENST00000465132 Q8NA96 180 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 C7orf57Q8NEG2 295 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 PIWIL2Q8TC59 973 aaKnown RBP16.5■□□□□ 0.23
CPSF4-209ENST00000465132 ADAMTS18Q8TE60 1221 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 SSC4DQ8WTU2 575 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 NPLQ9BXD5 320 aaPredicted RBP16.5■□□□□ 0.23
CPSF4-209ENST00000465132 SHCBP1LQ9BZQ2 653 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 LUZP4Q9P127 313 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 GPN3Q9UHW5 284 aaPredicted RBP16.5■□□□□ 0.23
CPSF4-209ENST00000465132 G3BP2Q9UN86 482 aaKnown RBP16.5■□□□□ 0.23
CPSF4-209ENST00000465132 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
CPSF4-209ENST00000465132 ARHGAP10A1A4S6 786 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 A6NL46 340 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MAGEB17A8MXT2 336 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 C9J4A7 227 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 H3BMH7 237 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 ERI3O43414 337 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 GUCY1B2O75343 617 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 NSA2O95478 260 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 TGFB1P01137 390 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 RPS13P62277 151 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 OCRLQ01968 901 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 ATP1A4Q13733 1029 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 NCF4Q15080 339 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MS4A6EQ96DS6 147 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MOCOSQ96EN8 888 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 MFRPQ9BY79 579 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 CCDC134Q9H6E4 229 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 ZNF304Q9HCX3 659 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 GPR83Q9NYM4 423 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 ADAM29Q9UKF5 820 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 SLC12A4Q9UP95 1085 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 TIMM22Q9Y584 194 aa16.49■□□□□ 0.23
CPSF4-209ENST00000465132 SPTBN1Q01082 2364 aaKnown RBP16.49■□□□□ 0.23
CPSF4-209ENST00000465132 HCRTR1O43613 425 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 ITM2AO43736 263 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 B3GALT2O43825 422 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 RSL1D1O76021 490 aaKnown RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SSR2P43308 183 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 GSTM5P46439 218 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 NEK2P51955 445 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 RRADP55042 308 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 MTTPP55157 894 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 MAD2L1Q13257 205 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 ZNF385CQ66K41 422 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SLC6A19Q695T7 634 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 CLEC6AQ6EIG7 209 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 NUDT13Q86X67 352 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 LRRC34Q8IZ02 419 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 RBMXL3Q8N7X1 1067 aaKnown RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 KCT2Q8NC54 265 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 UTP15Q8TED0 518 aaKnown RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 TWIST2Q8WVJ9 160 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 PNPLA2Q96AD5 504 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 MMABQ96EY8 250 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 PPP3R2Q96LZ3 170 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SERINC2Q96SA4 455 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SMAD5Q99717 465 aaKnown RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SLAMF7Q9NQ25 335 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 MS4A12Q9NXJ0 267 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 ZDHHC2Q9UIJ5 367 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 NXT1Q9UKK6 140 aaKnown RBP16.48■□□□□ 0.23
CPSF4-209ENST00000465132 PADI2Q9Y2J8 665 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 TMED5Q9Y3A6 229 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 DNAJC15Q9Y5T4 150 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 ICE1Q9Y2F5 2266 aa16.48■□□□□ 0.23
CPSF4-209ENST00000465132 SHANK1Q9Y566 2161 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 A0A1B0GTL3 188 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 SYNDIG1LA6NDD5 238 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 TCP11X1B4DZS4 312 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 HDAC3O15379 428 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 P2RX6O15547 441 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 LYPLA1O75608 230 aaPredicted RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 TGDSO95455 350 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ALBP02768 609 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ZNF888P0CJ79 500 aaPredicted RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 RNF224P0DH78 156 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ITGAXP20702 1163 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 FBLP22087 321 aaKnown RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 MAPK1P28482 360 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 GCGRP47871 477 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 DSG2Q14126 1118 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ABRAXAS2Q15018 415 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 SPDYAQ5MJ70 313 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 OR4C11Q6IEV9 310 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ABHD17CQ6PCB6 329 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 VN1R5Q7Z5H4 357 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms