RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CCR8P51685 355 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 PGDP52209 483 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ARF5P84085 180 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 COQ5Q5HYK3 327 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 FAAH2Q6GMR7 532 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 DCDC5Q6ZRR9 648 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 HIST3H2AQ7L7L0 130 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 OR4E2Q8NGC2 313 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 HIST1H2ACQ93077 130 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 CIDECQ96AQ7 238 aaPredicted RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 P2RY13Q9BPV8 354 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 EHD1Q9H4M9 534 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TMEM27Q9HBJ8 222 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 P2RX2Q9UBL9 471 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 GVINP1Q7Z2Y8 2422 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 RIIAD1A6NNX1 92 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 COQ9O75208 318 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 GSRP00390 522 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ALPPP05187 535 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 CBSLP0DN79 551 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 CSNK2A2P19784 350 aaPredicted RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 CBSP35520 551 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TBRG1Q3YBR2 411 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 OR7G3Q8NG95 312 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 OR9A1PQ8NGU1 263 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 PMEPA1Q969W9 287 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TUBA1CQ9BQE3 449 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 HDHD5Q9BXW7 423 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 RBCK1Q9BYM8 510 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 DNAJC13O75165 2243 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TRAV6A0A075B6T7 132 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SOCS5O75159 536 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 FGF18O76093 207 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 NFATC1O95644 943 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SOD2P04179 222 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 CAPNS1P04632 268 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SLC35G6P0C7Q6 338 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 ALAS2P22557 587 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SSTR4P31391 388 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SLC9A3P48764 834 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SPINT3P49223 89 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 TUBA1BP68363 451 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 LGALS3BPQ08380 585 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 ZNF630Q2M218 657 aaPredicted RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 TMEM53Q6P2H8 277 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 TUBA1AQ71U36 451 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 COMMD6Q7Z4G1 85 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 ZSWIM9Q86XI8 627 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 TIGD4Q8IY51 512 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 FAM46DQ8NEK8 389 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 OR4C6Q8NH72 309 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 C9orf43Q8TAL5 461 aaPredicted RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 RASSF5Q8WWW0 418 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 IRF7Q92985 503 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SLC39A13Q96H72 371 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 C11orf84Q9BUA3 381 aaPredicted RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 TTLL2Q9BWV7 592 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 MMP27Q9H306 513 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 DCAF13Q9NV06 445 aaKnown RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 INTS6Q9UL03 887 aaKnown RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 SESN1Q9Y6P5 492 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 CABIN1Q9Y6J0 2220 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 CAPN15O75808 1086 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 RPP14O95059 124 aaKnown RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 ALPLP05186 524 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 C7P10643 843 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 PORP16435 677 aaPredicted RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 BTN3A2P78410 334 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 PIN1Q13526 163 aaPredicted RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 SPHARQ15513 63 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 SLC30A6Q6NXT4 461 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 FAM220AQ7Z4H9 259 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 MRPL10Q7Z7H8 261 aaKnown RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 CELF5Q8N6W0 485 aaKnown RBP8.71□□□□□ -1.01
HPS4-208ENST00000464362 RFKQ969G6 155 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 RGMAQ96B86 450 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 WDR26Q9H7D7 661 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 PCDHA9Q9Y5H5 950 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 STON1Q9Y6Q2 735 aa8.71□□□□□ -1.01
HPS4-208ENST00000464362 URADA6NGE7 173 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 MROH6A6NGR9 719 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 J3QLW9 94 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 FHP07954 510 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SRCP12931 536 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ZNF19P17023 458 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 CDKN2CP42773 168 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 OMPP47874 163 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 HK3P52790 923 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 RAB15P59190 212 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ANKRD13BQ86YJ7 626 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 OR4N5Q8IXE1 308 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 PELI3Q8N2H9 469 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ZNF563Q8TA94 476 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SCRN2Q96FV2 425 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SH3YL1Q96HL8 342 aaPredicted RBP8.71□□□□□ -1.02
HPS4-208ENST00000464362 LRR1Q96L50 414 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SLC22A4Q9H015 551 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 HCFC1R1Q9NWW0 138 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms