RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SHQ1Q6PI26 577 aaKnown RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 PIWIL3Q7Z3Z3 882 aaKnown RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 HEATR4Q86WZ0 1026 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 OFCC1Q8IZS5 231 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 C8orf59Q8N0T1 100 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 LMX1AQ8TE12 382 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ADAMTS14Q8WXS8 1223 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 NCLNQ969V3 563 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ISOC1Q96CN7 298 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 COQ8BQ96D53 544 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF514Q96K75 400 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 MUS81Q96NY9 551 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 TBCDQ9BTW9 1192 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 TCEAL2Q9H3H9 227 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 TOR3AQ9H497 397 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 FAM118AQ9NWS6 357 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 RPS6KA6Q9UK32 745 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 PCDHGA1Q9Y5H4 931 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 KCNE2Q9Y6J6 123 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 TPRP12270 2363 aaKnown RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 OR2AG2A6NM03 316 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 MAGEB17A8MXT2 336 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 E7EQ34 232 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 CLIC1O00299 241 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.89
PTPRD-207ENST00000463477 GNGT2O14610 69 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 SCAMP2O15127 329 aaKnown RBP9.46□□□□□ -0.89
PTPRD-207ENST00000463477 YY2O15391 372 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 MTX2O75431 263 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 CLIC3O95833 236 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 CEACAM5P06731 702 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 PCNAP12004 261 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 CTSEP14091 401 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 PCSK6P29122 969 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 RYKP34925 604 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 RAD23AP54725 363 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ILKQ13418 452 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 NAE1Q13564 534 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ELOCQ15369 112 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 VMACQ2NL98 169 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 BROXQ5VW32 411 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 AP1ARQ63HQ0 302 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 DOK6Q6PKX4 331 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 TMEM220Q6QAJ8 160 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 SLCO4C1Q6ZQN7 724 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF551Q7Z340 670 aaPredicted RBP9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ZZZ3Q8IYH5 903 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 C10orf111Q8N326 155 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 FBLIM1Q8WUP2 373 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 CHTF18Q8WVB6 975 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 OR1E3Q8WZA6 343 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF566Q969W8 418 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.89
PTPRD-207ENST00000463477 COX14Q96I36 57 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 MAGED4Q96JG8 741 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 EGLN2Q96KS0 407 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 OR4K3Q96R72 315 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 MBOAT4Q96T53 435 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 PKP4Q99569 1192 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 EFCAB11Q9BUY7 163 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 LRRC61Q9BV99 259 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 SGPP1Q9BX95 441 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 FGF22Q9HCT0 170 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 IL1RAPQ9NPH3 570 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 SLC17A4Q9Y2C5 497 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 PCDHB11Q9Y5F2 797 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 HSPE1-MOB4S4R3N1 261 aa9.46□□□□□ -0.89
PTPRD-207ENST00000463477 COL5A1P20908 1838 aaPredicted RBP9.46□□□□□ -0.89
PTPRD-207ENST00000463477 TP53BP1Q12888 1972 aaPredicted RBP9.46□□□□□ -0.9
PTPRD-207ENST00000463477 PRSS38A1L453 326 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 FAM221BA6H8Z2 402 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SEC24DO94855 1032 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C1orf105O95561 183 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SLC16A8O95907 504 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 FUCA1P04066 466 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CKMT1AP12532 417 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 COX7A2P14406 83 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CRHBPP24387 322 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ACP1P24666 158 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SHMT2P34897 504 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 HPCAL1P37235 193 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RPL3P39023 403 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RAE1P78406 368 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C1orf61Q13536 156 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 LAPTM5Q13571 262 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RAB39AQ14964 217 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ZCCHC8Q6NZY4 707 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 MED27Q6P2C8 311 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CBLL1Q75N03 491 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RD3Q7Z3Z2 195 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CLVS1Q8IUQ0 354 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ZDHHC21Q8IVQ6 265 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 LAS2Q8IYD9 372 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ARL10Q8N8L6 244 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms