RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CHST10O43529 356 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 B3GALT2O43825 422 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 RDH16O75452 317 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 SCRG1O75711 98 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 SLC22A3O75751 556 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 IL3P08700 152 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 PIK3R1P27986 724 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 RORAP35398 523 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 NME5P56597 212 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 RAB15P59190 212 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 STX1BP61266 288 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 MC1RQ01726 317 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 KLC1Q07866 573 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 UGT8Q16880 541 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 PRMT9Q6P2P2 845 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 BLOC1S3Q6QNY0 202 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 TRPM8Q7Z2W7 1104 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 CAMKMTQ7Z624 323 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 MMP21Q8N119 569 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 OR5T3Q8NGG3 340 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 UCN3Q969E3 161 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 TESCQ96BS2 214 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-202ENST00000463060 LRFN5Q96NI6 719 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 GBP5Q96PP8 586 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 TAAR9Q96RI9 348 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 ZPBPQ9BS86 351 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 DDA1Q9BW61 102 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 B3GNT4Q9C0J1 378 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 ACTR5Q9H9F9 607 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-202ENST00000463060 COPS7BQ9H9Q2 264 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-202ENST00000463060 PRDM9Q9NQV7 894 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 SLC22A11Q9NSA0 550 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 TAS2R7Q9NYW3 318 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 CES1P1Q9UKY3 287 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 B3GALT1Q9Y5Z6 326 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 ARHGAP10A1A4S6 786 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 DCDC2BA2VCK2 349 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 PGRMC2O15173 223 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 HBQ1P09105 142 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 FURINP09958 794 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 DRD2P14416 443 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF28P17035 718 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 ALAS2P22557 587 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 AVPR1BP47901 424 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 SKP1P63208 163 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 PHC1P78364 1004 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 OLR1P78380 273 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 C2orf80Q0P641 193 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 DSG2Q14126 1118 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 RCAN2Q14206 197 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 AGKQ53H12 422 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 DCAF12Q5T6F0 453 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 NDUFAF5Q5TEU4 345 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 CEACAM20Q6UY09 585 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 TMEM126BQ8IUX1 230 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 GLB1L3Q8NCI6 653 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-202ENST00000463060 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-202ENST00000463060 ERP27Q96DN0 273 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 MTERF3Q96E29 417 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-202ENST00000463060 DPY30Q9C005 99 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 REEP4Q9H6H4 257 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 MS4A12Q9NXJ0 267 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 PHF11Q9UIL8 331 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 FBXW2Q9UKT8 454 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 PCDHGA8Q9Y5G5 932 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 PCDHA9Q9Y5H5 950 aa13.55□□□□□ -0.24
COL6A1-202ENST00000463060 IGLV3-12A0A075B6K2 115 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 WASHC1A8K0Z3 465 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 C9orf172C9J069 976 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
COL6A1-202ENST00000463060 AKAP10O43572 662 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 SCN2BO60939 215 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 LRATO95237 230 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 AIFM1O95831 613 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 NTRK1P04629 796 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 T-ENOLP0DO92 83 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 PIM1P11309 404 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-202ENST00000463060 DDCP20711 480 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 PRDX6P30041 224 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 OR1D4P47884 311 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 POLR2JP52435 117 aaKnown RBP13.54□□□□□ -0.24
COL6A1-202ENST00000463060 RAB38P57729 211 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 KRT72Q14CN4 511 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 HEPACAMQ14CZ8 416 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms