RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	AIF1L	Q9BQI0	150 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	TTYH2	Q9BSA4	534 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	SH2D2A	Q9NP31	389 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	ADAP2	Q9NPF8	381 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	KCNJ16	Q9NPI9	418 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	TIMMDC1	Q9NPL8	285 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	PNO1	Q9NRX1	252 aa	Known RBP	10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	MYOT	Q9UBF9	498 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	PSAT1	Q9Y617	370 aa		10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	PRRC2A	P48634	2157 aa	Known RBP	10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815	FLNA	P21333	2647 aa	Known RBP	10.35	□□□□□ -0.75
PTPN7-204	ENST00000462815		A0A0G2JNJ9	132 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	OR14I1	A6ND48	311 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	NPEPPSL1	A6NEC2	478 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TP73	O15350	636 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ZFAND5	O76080	213 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	CELA3A	P09093	270 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	C1GALT1C1L	P0DN25	315 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ACVR2A	P27037	513 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	GDF5	P43026	501 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	LIM2	P55344	173 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	PPIA	P62937	165 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	FRG1	Q14331	258 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ZNF460	Q14592	562 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	RBBP5	Q15291	538 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ELAVL1	Q15717	326 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	IL20RB	Q6UXL0	311 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TRIL	Q7L0X0	811 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ZNF595	Q8IYB9	648 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TMEM251	Q8N6I4	163 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	GPATCH11	Q8N954	259 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	FAM47B	Q8NA70	645 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ARMC2	Q8NEN0	867 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	RHBDF1	Q96CC6	855 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	PBK	Q96KB5	322 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	SCYL1	Q96KG9	808 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TMEM79	Q9BSE2	394 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TRIM54	Q9BYV2	358 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	DLL4	Q9NR61	685 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	PRTFDC1	Q9NRG1	225 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ZNF358	Q9NW07	568 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	TRMT1	Q9NXH9	659 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815		Q9UFV3	132 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	DAPP1	Q9UN19	280 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	DYRK1B	Q9Y463	629 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	OARD1	Q9Y530	152 aa		10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.34	□□□□□ -0.75
PTPN7-204	ENST00000462815		A8MVJ9	347 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	NPIPA2	E9PIF3	369 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	NPIPA3	F8WFD2	350 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815		G3V3Y1	287 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	PGRMC1	O00264	195 aa	Known RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	WWP2	O00308	870 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	AQP7	O14520	342 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	TAPBP	O15533	448 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZSCAN12	O43309	604 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ERI3	O43414	337 aa	Known RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	CLEC3A	O75596	197 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	CTAG2	O75638	210 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	EPOR	P19235	508 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	CD22	P20273	847 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	CERS1	P27544	350 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	MAGEA5	P43359	124 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	STXBP1	P61764	594 aa	Known RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	E2F2	Q14209	437 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	SLBP	Q14493	270 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZNF750	Q32MQ0	723 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ABHD17C	Q6PCB6	329 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	LYPD8	Q6UX82	237 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	TMIGD1	Q6UXZ0	262 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZNF793	Q6ZN11	406 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	RGS9BP	Q6ZS82	235 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	SEM1	Q6ZVN7	128 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ACAD11	Q709F0	780 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	UBE3D	Q7Z6J8	389 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	CLNK	Q7Z7G1	428 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZC3HC1	Q86WB0	502 aa	Known RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	OR2L5	Q8NG80	312 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	OR5M9	Q8NGP3	310 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	OR8K3	Q8NH51	312 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ACTRT1	Q8TDG2	376 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	SLCO2A1	Q92959	643 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	NINJ1	Q92982	152 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	WDR34	Q96EX3	536 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	SMC6	Q96SB8	1091 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	FOXC2	Q99958	501 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZNF559	Q9BR84	538 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	NAT9	Q9BTE0	207 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	LIME1	Q9H400	295 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	NT5DC2	Q9H857	520 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	IL1RL2	Q9HB29	575 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	PROK2	Q9HC23	129 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	PRDM7	Q9NQW5	492 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	HPF1	Q9NWY4	346 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	VTI1B	Q9UEU0	232 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	JRKL	Q9Y4A0	524 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	TEX264	Q9Y6I9	313 aa		10.33	□□□□□ -0.76
PTPN7-204	ENST00000462815	KCNE2	Q9Y6J6	123 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms