RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FBXO8Q9NRD0 319 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SLC39A1Q9NY26 324 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 AKAP7Q9P0M2 348 aaPredicted RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 TMEM9Q9P0T7 183 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 IL36RNQ9UBH0 155 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 NDRG3Q9UGV2 375 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SLC12A6Q9UHW9 1150 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SMC3Q9UQE7 1217 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CAMK2AQ9UQM7 478 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ENTPD4Q9Y227 616 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ZNF407Q9C0G0 2248 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 PHF3Q92576 2039 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 HEATR5BQ9P2D3 2071 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TMEM202A6NGA9 273 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 NPIPB15A6NHN6 443 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 LRRC53A6NM62 1247 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MS4A18H0YCH9 400 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CALUO43852 315 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 CEACAM4O75871 244 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 STK17BO94768 372 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MTA2O94776 668 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CLDN7O95471 211 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 ADCY5O95622 1261 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MT-CYBP00156 380 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 CALCAP01258 141 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TNFP01375 233 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TFP02787 698 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 FGF1P05230 155 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 RHOCP08134 193 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 KRT13P13646 458 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CDH2P19022 906 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 TNFRSF1BP20333 461 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CHATP28329 748 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CXCR3P49682 368 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 ZNF81P51508 661 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 NAP1L1P55209 391 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 DCAF7P61962 342 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 YWHAEP62258 255 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 NUCB2P80303 420 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 ADORA2A-AS1P86434 159 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CEBPZQ03701 1054 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 RNPS1Q15287 305 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 NADK2Q4G0N4 442 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 PRR30Q53SZ7 412 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 DCAF12Q5T6F0 453 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 DCAF12L2Q5VW00 463 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 RESP18Q5W5W9 173 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CDC73Q6P1J9 531 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TMEM270Q6UE05 265 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 CEACAM20Q6UY09 585 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 SPNS3Q6ZMD2 512 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 NEK10Q6ZWH5 1172 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TAF8Q7Z7C8 310 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 TBC1D1Q86TI0 1168 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 TMEM135Q86UB9 458 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 GPAT4Q86UL3 456 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 DEFB106AQ8N104 65 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 NAGSQ8N159 534 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 PELI3Q8N2H9 469 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 GUF1Q8N442 669 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 CCDC112Q8NEF3 446 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 OR2AP1Q8NGE2 309 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 OR56A4Q8NGH8 313 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 INPP5DQ92835 1189 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 ARHGEF2Q92974 986 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 SLC25A28Q96A46 364 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 KIAA1143Q96AT1 154 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 MOCOSQ96EN8 888 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 PGAP3Q96FM1 320 aaPredicted RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 C1orf74Q96LT6 269 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 RANBP9Q96S59 729 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 SLC29A3Q9BZD2 475 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 ZDHHC6Q9H6R6 413 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 APMAPQ9HDC9 416 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MRPL40Q9NQ50 206 aaKnown RBP4.63□□□□□ -1.67
COPS3-204ENST00000462236 DDIT4Q9NX09 232 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 NEU3Q9UQ49 428 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MTMR6Q9Y217 621 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 MFHAS1Q9Y4C4 1052 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 RPS6KL1Q9Y6S9 549 aa4.63□□□□□ -1.67
COPS3-204ENST00000462236 PGPEP1LA6NFU8 196 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 B4DGG1 531 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 LDLRAD4O15165 306 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 SLC25A17O43808 307 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 YEATS4O95619 227 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 POP4O95707 220 aaKnown RBP4.62□□□□□ -1.67
COPS3-204ENST00000462236 UGT2B4P06133 528 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 CCNB1P14635 433 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 SRD5A1P18405 259 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 SYT1P21579 422 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 CSTF2P33240 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
COPS3-204ENST00000462236 MMP12P39900 470 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 FASLGP48023 281 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 LEPRP48357 1165 aaKnown RBP4.62□□□□□ -1.67
COPS3-204ENST00000462236 SUOXP51687 545 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 NDST2P52849 883 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 GNA12Q03113 381 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 RUNX2Q13950 521 aa4.62□□□□□ -1.67
COPS3-204ENST00000462236 MYLK3Q32MK0 819 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms