RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ITM2BQ9Y287 266 aa2.86□□□□□ -1.95
RFC4-211ENST00000460408 TOP2AP11388 1531 aaKnown RBP2.86□□□□□ -1.95
RFC4-211ENST00000460408 LRP5O75197 1615 aa2.86□□□□□ -1.95
RFC4-211ENST00000460408 RAPGEF6Q8TEU7 1601 aa2.86□□□□□ -1.95
RFC4-211ENST00000460408 ABCA5Q8WWZ7 1642 aa2.86□□□□□ -1.95
RFC4-211ENST00000460408 TNIKQ9UKE5 1360 aa2.86□□□□□ -1.95
RFC4-211ENST00000460408 UACAQ9BZF9 1416 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CDK12Q9NYV4 1490 aaPredicted RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 ANHXE9PGG2 379 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CACNB4O00305 520 aaPredicted RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 SIGLEC5O15389 551 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ARHGEF9O43307 516 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 STBD1O95210 358 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 SBK2P0C263 348 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ACKR3P25106 362 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 SLC1A3P43003 542 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CLK1P49759 484 aaKnown RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 TNFSF10P50591 281 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 HUNKP57058 714 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 IRX1P78414 480 aaPredicted RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 MFGE8Q08431 387 aaPredicted RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 NPRL3Q12980 569 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 RPA4Q13156 261 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 FCN2Q15485 313 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ZNF613Q6PF04 617 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 C3P1Q6ZMU1 363 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CYP4V2Q6ZWL3 525 aaPredicted RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 ZER1Q7Z7L7 766 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 TMEM126BQ8IUX1 230 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 SLC43A2Q8N370 569 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CLEC1AQ8NC01 280 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 PRSS33Q8NF86 280 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 NUP37Q8NFH4 326 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 OR5M9Q8NGP3 310 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 SNX21Q969T3 373 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 C11orf52Q96A22 123 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ATP6V0BQ99437 205 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 DDX50Q9BQ39 737 aaKnown RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 NUSAP1Q9BXS6 441 aaKnown RBP2.85□□□□□ -1.95
RFC4-211ENST00000460408 FGFBP2Q9BYJ0 223 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 LRRC2Q9BYS8 371 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 NAPBQ9H115 298 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 CYP39A1Q9NYL5 469 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 UBQLN2Q9UHD9 624 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 MAD2L2Q9UI95 211 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 LNPEPQ9UIQ6 1025 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ETV7Q9Y603 341 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 TEX264Q9Y6I9 313 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 RNF123Q5XPI4 1314 aa2.85□□□□□ -1.95
RFC4-211ENST00000460408 ABCA10Q8WWZ4 1543 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 KDM5BQ9UGL1 1544 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 TP53BP1Q12888 1972 aaPredicted RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 CAMSAP1Q5T5Y3 1602 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 IGLV7-46A0A075B6I9 117 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 LOC105371242A0A075B767 164 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 ATP6AP2A0A1C7CYW4 349 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 SLC15A5A6NIM6 579 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 A8MU76 341 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 DDX39AO00148 427 aaKnown RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 SYT7O43581 403 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 VEGFDO43915 354 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 FGF19O95750 216 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 BAG2O95816 211 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 ANGPTL1O95841 491 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 PNPP00491 289 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 NUDT17P0C025 328 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 GIFP27352 417 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 PDHA2P29803 388 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 GPR183P32249 361 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 VEGFCP49767 419 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 LUMP51884 338 aaPredicted RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 BACE1P56817 501 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 EVCP57679 992 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 UBXN1Q04323 297 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 CALCOCO2Q13137 446 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 PPP2R5CQ13362 524 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 NFATC2Q13469 925 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 LY6DQ14210 128 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 GK2Q14410 553 aaPredicted RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 FAM189A2Q15884 450 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 MOGAT2Q3SYC2 334 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 C14orf177Q52M58 125 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 IFI44LQ53G44 452 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 RAPH1Q70E73 1250 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 CHMP1BQ7LBR1 199 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 NLRP14Q86W24 1093 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 SERPINA12Q8IW75 414 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 ZNF444Q8N0Y2 327 aaPredicted RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 OR13C5Q8NGS8 318 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 RPLP0P6Q8NHW5 317 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 C8orf46Q8TAG6 207 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 ST7LQ8TDW4 575 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 ATP8B4Q8TF62 1192 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 MOCOSQ96EN8 888 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 CCDC43Q96MW1 224 aaKnown RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 SYT11Q9BT88 431 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 NTMT1Q9BV86 223 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 MTIF3Q9H2K0 278 aaKnown RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 ZNF665Q9H7R5 613 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms