RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 DBTP11182 482 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 DDX6P26196 483 aaKnown RBP eCLIP14.76□□□□□ -0.058e-10■■■■□ 23.3
LMNB1-203ENST00000460265 TIE1P35590 1138 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 GPLD1P80108 840 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 SP140Q13342 867 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF234Q14588 700 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 KIAA0040Q15053 153 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 TMIGD1Q6UXZ0 262 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 LINC00299Q6ZSB3 139 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 TMEM179BQ7Z7N9 219 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 METTL4Q8N3J2 472 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 OR9A1PQ8NGU1 263 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 OR6F1Q8NGZ6 308 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 VANGL1Q8TAA9 524 aaPredicted RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 MACROD1Q9BQ69 325 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 CPNE3O75131 537 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 GRK3P35626 688 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 PUS10Q3MIT2 529 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 COMMD6Q7Z4G1 85 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 WDR48Q8TAF3 677 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 FAR1Q8WVX9 515 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 RAB8BQ92930 207 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 BARD1Q99728 777 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 APOL4Q9BPW4 351 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 NECTIN3Q9NQS3 549 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 MAT2BQ9NZL9 334 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 DPP7Q9UHL4 492 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 CHD7Q9P2D1 2997 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3DA0A087WVF3 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3IA0A087WXS9 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3EA0A087X179 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3KA0A087X1G2 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3FA6NER0 549 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3LB9A6J9 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 GFYI3L273 518 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 POLR1CO15160 346 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 AP2A2O94973 939 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3HP0C7X1 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ADRB3P13945 408 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ST13P50502 369 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 NUDT6P53370 316 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 RAPSNQ13702 412 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 SPATS1Q496A3 300 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ANXA8L1Q5VT79 327 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3GQ6DHY5 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3CQ6IPX1 549 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 RNF130Q86XS8 419 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TBC1D3Q8IZP1 549 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 KRT78Q8N1N4 520 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 NFKBIDQ8NI38 313 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PHF10Q8WUB8 498 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 XAGE5Q8WWM1 108 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 UBE2FQ969M7 185 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 OR4K3Q96R72 315 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 GORASP2Q9H8Y8 452 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 A0A1W2PRB8 838 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ERVH48-1M5A8F1 160 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 AGRPO00253 132 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 MTRF1O75570 445 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF8P17098 575 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 MAPK12P53778 367 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 EPS8Q12929 822 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 CSTF3Q12996 717 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PRAMEF14Q5SWL7 426 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 HENMT1Q5T8I9 393 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PRAMEF13Q5VWM6 474 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.052e-6■□□□□ 9.4
LMNB1-203ENST00000460265 SVOPLQ8N434 492 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 HDDC3Q8N4P3 179 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 COL26A1Q96A83 441 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ARRDC3Q96B67 414 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 LGALS12Q96DT0 336 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 F2RL3Q96RI0 385 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 CPPED1Q9BRF8 314 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 YIPF4Q9BSR8 244 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 NLNQ9BYT8 704 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 NUAK2Q9H093 628 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PAK1IP1Q9NWT1 392 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 THUMPD1Q9NXG2 353 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 SEC16AO15027 2179 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 TNFRSF11BO00300 401 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 GABARAPO95166 117 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 PRKACAP17612 351 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ATF4P18848 351 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 FSHRP23945 695 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 MAP2K4P45985 399 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 VLDLRP98155 873 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF77Q15935 545 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 DPY19L1Q2PZI1 675 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 Q6ZPB1 254 aaPredicted RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 GDPD3Q7L5L3 318 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 FAM109AQ8N4B1 249 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 VN1R2Q8NFZ6 395 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 SLC5A11Q8WWX8 675 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 RPL3LQ92901 407 aaKnown RBP14.75□□□□□ -0.05
LMNB1-203ENST00000460265 FGF13Q92913 245 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 C12orf66Q96MD2 445 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 AHSPQ9NZD4 102 aa14.75□□□□□ -0.05
LMNB1-203ENST00000460265 ARHGEF9O43307 516 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms