RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 SQLEQ14534 574 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 STXBP2Q15833 593 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SNAPC1Q16533 368 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 IL17AQ16552 155 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CA9Q16790 459 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CCDC122Q5T0U0 273 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CFAP58Q5T655 872 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 KRT39Q6A163 491 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 C11orf63Q6NUN7 778 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 C4orf22Q6V702 233 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 C1orf186Q6ZWK4 172 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 H2AFVQ71UI9 128 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 ARCQ7LC44 396 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 KIAA1328Q86T90 577 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 GPBP1Q86WP2 473 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 ERO1BQ86YB8 467 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 IFT20Q8IY31 132 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 MMGT1Q8N4V1 131 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF611Q8N823 705 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SPC24Q8NBT2 197 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 BBOF1Q8ND07 529 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 MAPK1IP1LQ8NDC0 245 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 OR2T6Q8NHC8 308 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CCDC26Q8TAB7 109 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 ACTRT1Q8TDG2 376 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 GRK7Q8WTQ7 553 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 PHLDA1Q8WV24 401 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CCDC107Q8WV48 283 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SCFD1Q8WVM8 642 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SSMEM1Q8WWF3 244 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 CTNNBL1Q8WYA6 563 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SUSD6Q92537 303 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 DYRK2Q92630 601 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 P3H4Q92791 437 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SLC35C1Q96A29 364 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 EXOC4Q96A65 974 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 NXNL1Q96CM4 212 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 LRRC45Q96CN5 670 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF830Q96NB3 372 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 GCNAQ96QF7 691 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 RAB17Q9H0T7 212 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 OPA3Q9H6K4 179 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 TDRD3Q9H7E2 651 aaKnown RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 NHEJ1Q9H9Q4 299 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 DBNDD1Q9H9R9 158 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 MRPL47Q9HD33 250 aaKnown RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 RNF186Q9NXI6 227 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 DPP3Q9NY33 737 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 WDR35Q9P2L0 1181 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 EPHA6Q9UF33 1036 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 GGA2Q9UJY4 613 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 PYCARDQ9ULZ3 195 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SNX12Q9UMY4 172 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 PPIEQ9UNP9 301 aaKnown RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 Q9Y3F1 56 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 NME7Q9Y5B8 376 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 MAGED1Q9Y5V3 778 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 PARP14Q460N5 1801 aa3.2□□□□□ -1.9
SSX2IP-204ENST00000459708 PHIPQ8WWQ0 1821 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 MYH7BA7E2Y1 1941 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 A0A1W2PPM1 405 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 ANKRD61A6NGH8 418 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 YDJCA8MPS7 323 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 KRTAP16-1A8MUX0 517 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 FAM86B1E9PN63 330 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 SLCO1B7G3V0H7 640 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF195O14628 629 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 ARHGEF9O43307 516 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 RPS6KA5O75582 802 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 CLDN1O95832 211 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 FAM86B2P0C5J1 330 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 CEBPBP17676 345 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 CA6P23280 308 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 JAK1P23458 1154 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 TMOD1P28289 359 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 AXLP30530 894 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 YWHABP31946 246 aaKnown RBP3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 NNMTP40261 264 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 FNTAP49354 379 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 LUMP51884 338 aaPredicted RBP3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 KLHL30Q0D2K2 578 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 RASA2Q15283 850 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 CBWD6Q4V339 395 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 SYT14P1Q58G82 188 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 CBWD3Q5JTY5 395 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 LRRC38Q5VT99 294 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 KLHL10Q6JEL2 608 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 PSRC1Q6PGN9 363 aaPredicted RBP3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 WDR59Q6PJI9 974 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 IL27RAQ6UWB1 636 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 METTL7BQ6UX53 244 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 SYT10Q6XYQ8 523 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 MIER3Q7Z3K6 550 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 ARHGAP22Q7Z5H3 698 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 SLFN11Q7Z7L1 901 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF410Q86VK4 478 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 LACC1Q8IV20 430 aa3.19□□□□□ -1.9
SSX2IP-204ENST00000459708 KIRREL3Q8IZU9 778 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms