RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SIRPB2Q5JXA9 342 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM74A1Q5RGS3 127 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ARMC4Q5T2S8 1044 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 WSCD1Q658N2 575 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 EFCAB12Q6NXP0 572 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SHQ1Q6PI26 577 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TMPRSS11AQ6ZMR5 421 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PGBD3Q8N328 593 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 BEST2Q8NFU1 509 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PTP4A1Q93096 173 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RDH12Q96NR8 316 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 DDOQ99489 341 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TRMOQ9BU70 441 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TRMT61BQ9BVS5 477 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MRIQ9BWK5 157 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF768Q9H5H4 540 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TXNL4BQ9NX01 149 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 C1orf109Q9NX04 203 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 DNAJC27Q9NZQ0 273 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MKLN1Q9UL63 735 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNH4Q9UQ05 1017 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TICRRQ7Z2Z1 1910 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A0A6YYJ9 748 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM234BA2RU67 622 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 FPGTO14772 594 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CD160O95971 181 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 IGLV3-25P01717 112 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 IGHA2P01877 340 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PTGER1P34995 402 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ARL4AP40617 200 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CD86P42081 329 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 HAAOP46952 286 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CSTF1Q05048 431 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SNAPC1Q16533 368 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF805Q5CZA5 627 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 BCL2L15Q5TBC7 163 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ANKRD54Q6NXT1 300 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RFLNAQ6ZTI6 216 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PAQR7Q86WK9 346 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RASAL3Q86YV0 1011 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 STK40Q8N2I9 435 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TOR1AIP2Q8NFQ8 470 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 METTL6Q8TCB7 284 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PCED1BQ96HM7 432 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PYURFQ96I23 114 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 OSMRQ99650 979 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 IER2Q9BTL4 223 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF304Q9HCX3 659 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CA10Q9NS85 328 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PLCXD1Q9NUJ7 323 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 NUDT15Q9NV35 164 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 COA4Q9NYJ1 87 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 KLHL21Q9UJP4 597 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ACSL6Q9UKU0 697 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SCN4AP35499 1836 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SMIM28A0A1B0GU29 152 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 BBIP1A8MTZ0 92 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 KPNA5O15131 536 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 KLK8O60259 260 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SELENOFO60613 162 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 DNAJB5O75953 348 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 HPRP00739 348 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ADCYAP1P18509 176 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SDC1P18827 310 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 S100A5P33763 92 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MAGEB1P43366 347 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CTSCP53634 463 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ACVR1Q04771 509 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 NHLRC3Q5JS37 347 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 UNQ6494/PRO21346Q6UXR6 183 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MMP21Q8N119 569 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 OR8H3Q8N146 312 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 OR5K1Q8NHB7 308 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 HAVCR2Q8TDQ0 301 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 APOBEC4Q8WW27 367 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 DACT3Q96B18 629 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ULK4Q96C45 1275 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ORAI1Q96D31 301 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 APIPQ96GX9 242 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ART5Q96L15 291 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 FCRL2Q96LA5 508 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 WDFY2Q96P53 400 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM43Q9BTV4 400 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 C1QTNF3Q9BXJ4 246 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CHST8Q9H2A9 424 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC25A19Q9HC21 320 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 WBP1LQ9NX94 342 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 COMMD3Q9UBI1 195 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SPASTQ9UBP0 616 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MGAT4AQ9UM21 535 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 HRH3Q9Y5N1 445 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 TRAV6A0A075B6T7 132 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 PRAMEF27A3QJZ7 478 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 NPEPPSL1A6NEC2 478 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 A8MXK9 166 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 TSPAN1O60635 241 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SIX6O95475 246 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 MMP10P09238 476 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms