RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 EEF1A1P68104 462 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 POU4F1Q01851 419 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 EEF1A2Q05639 463 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GPM6BQ13491 265 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF460Q14592 562 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TAF1AQ15573 450 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF79Q15937 498 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RFX4Q33E94 735 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 COQ5Q5HYK3 327 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PRSS36Q5K4E3 855 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 EEF1A1P5Q5VTE0 462 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ANKRD54Q6NXT1 300 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 FAM180BQ6P0A1 224 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RHOUQ7L0Q8 258 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GLT6D1Q7Z4J2 308 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GRASPQ7Z6J2 395 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TMEM25Q86YD3 366 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 FUNDC1Q8IVP5 155 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ZZZ3Q8IYH5 903 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PNPLA1Q8N8W4 532 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CNIH3Q8TBE1 160 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 IPCEF1Q8WWN9 437 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TMEM125Q96AQ2 219 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CDKN2AIPNLQ96HQ2 116 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SMIM14Q96QK8 99 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MCCC1Q96RQ3 725 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 OMDQ99983 421 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 C1QTNF1Q9BXJ1 281 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GPR63Q9BZJ6 419 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TM6SF2Q9BZW4 377 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 LTB4R2Q9NPC1 389 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ABCB8Q9NUT2 735 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 NLE1Q9NVX2 485 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SPATA6Q9NWH7 488 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RUVBL2Q9Y230 463 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SESN1Q9Y6P5 492 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RNF215Q9Y6U7 377 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TRABD2BA6NFA1 517 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 A8MXK9 166 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SMLR1H3BR10 107 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 CD3EAPO15446 510 aaKnown RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PRAMEF12O95522 483 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 NPPAP01160 153 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 LCKP06239 509 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SBK3P0C264 359 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 CD72P21854 359 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF140P52738 457 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PLK1P53350 603 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 EEFSECP57772 596 aaKnown RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 AP1S1P61966 158 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF425Q6IV72 752 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 MRNIPQ6NTE8 343 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SLC27A4Q6P1M0 643 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PROSER1Q86XN7 944 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 CENPLQ8N0S6 344 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 TMEM151AQ8N4L1 468 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 EFHBQ8N7U6 833 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ATG16L2Q8NAA4 619 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 GPR150Q8NGU9 434 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 OR4L1Q8NH43 312 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 COQ8BQ96D53 544 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 P2RY13Q9BPV8 354 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 TRIM54Q9BYV2 358 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 MS4A7Q9GZW8 240 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SMURF1Q9HCE7 757 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 BIN3Q9NQY0 253 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SDHAF2Q9NX18 166 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 BABAM2Q9NXR7 383 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 KCMF1Q9P0J7 381 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 EPHA6Q9UF33 1036 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 C3orf18Q9UK00 162 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PLCL2Q9UPR0 1127 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ERVW-1Q9UQF0 538 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ENTPD4Q9Y227 616 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PCDHB9Q9Y5E1 797 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 HCFC2Q9Y5Z7 792 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 PDE4DIPQ5VU43 2346 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 C2orf16Q68DN1 1984 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 A0A087X1B8 175 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 NEDD8-MDP1E9PL57 170 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 G3V2T6 193 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 BCKDKO14874 412 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 HTR3BO95264 441 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 DNTTP04053 509 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 GPX3P22352 226 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 KCNA5P22460 613 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 HTR1EP28566 365 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 GLRBP48167 497 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 LARS2Q15031 903 aaKnown RBP7.32□□□□□ -1.24
HDAC9-218ENST00000456174 SHHQ15465 462 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 LAIR1Q6GTX8 287 aa7.32□□□□□ -1.24
HDAC9-218ENST00000456174 ADGRD2Q7Z7M1 963 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms