RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 OR1F2PQ96R84 312 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 CTRCQ99895 268 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 C1orf50Q9BV19 199 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 TGIF2Q9GZN2 237 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 SLC26A1Q9H2B4 701 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF304Q9HCX3 659 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 TXLNGQ9NUQ3 528 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 DHCR7Q9UBM7 475 aaKnown RBP10.64□□□□□ -0.71
TRAF4-206ENST00000454852 PISDQ9UG56 409 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 EXO1Q9UQ84 846 aaKnown RBP10.64□□□□□ -0.71
TRAF4-206ENST00000454852 MAP4K5Q9Y4K4 846 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 B3GALT1Q9Y5Z6 326 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 COPG1Q9Y678 874 aaKnown RBP10.64□□□□□ -0.71
TRAF4-206ENST00000454852 KNTC1P50748 2209 aa10.64□□□□□ -0.71
TRAF4-206ENST00000454852 SPTBP11277 2137 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 A0A0G2JN53 185 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 GNG14A0A1W2PPG7 69 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 C1orf226A1L170 272 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 PMS2P1A4D2B8 440 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CDRT15L2A8MXV6 281 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 SGK494L7N484 410 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 MEN1O00255 615 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CYR61O00622 381 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CHST10O43529 356 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 RDH16O75452 317 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 B3GALT4O96024 378 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 ALBP02768 609 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CYC1P08574 325 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF28P17035 718 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 DDCP20711 480 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 GPX3P22352 226 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CLNS1AP54105 237 aaKnown RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 HNRNPH2P55795 449 aaKnown RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 DCDP81605 110 aaKnown RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 TNFRSF17Q02223 184 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 GABPB1Q06547 395 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 KLC1Q07866 573 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 PTGR1Q14914 329 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 HEPACAMQ14CZ8 416 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 DPY19L1Q2PZI1 675 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 C3orf38Q5JPI3 329 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 COX15Q7KZN9 410 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 MIER2Q8N344 545 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 C7orf57Q8NEG2 295 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 TSPEARQ8WU66 669 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 MMABQ96EY8 250 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 MAPKAP1Q9BPZ7 522 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 FAIM2Q9BWQ8 316 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 EBPLQ9BY08 206 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 NMUR2Q9GZQ4 415 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 CLMPQ9H6B4 373 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 PRM3Q9NNZ6 103 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 MKKSQ9NPJ1 570 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-206ENST00000454852 SLC22A11Q9NSA0 550 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 ATP6V1HQ9UI12 483 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 ATG4BQ9Y4P1 393 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 PCDHA9Q9Y5H5 950 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 SPACA6W5XKT8 324 aa10.63□□□□□ -0.71
TRAF4-206ENST00000454852 FER1L5A0AVI2 2057 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 A0A1W2PR48 441 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 DYTNA2CJ06 578 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FAM149AA5PLN7 773 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 VSTM2BA6NLU5 285 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FCHO1O14526 889 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 SCAMP2O15127 329 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 DNAJB6O75190 326 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 STK17BO94768 372 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 KIAA0754O94854 1291 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 AIFM1O95831 613 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 GBAP04062 536 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 NTRK1P04629 796 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 IL3P08700 152 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 CD63P08962 238 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FURINP09958 794 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 RNH1P13489 461 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 DDX5P17844 614 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 AGXTP21549 392 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FBLP22087 321 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 ALAS2P22557 587 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 BUD31P41223 144 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 ZFP36L2P47974 494 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 MAPK10P53779 464 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TAS2R50P59544 299 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 STX1BP61266 288 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 GABREP78334 506 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TERF2Q15554 542 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 CEBPEQ15744 281 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 NKAIN1Q4KMZ8 207 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 NDUFAF5Q5TEU4 345 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 MRPL14Q6P1L8 145 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 R3HCC1LQ7Z5L2 792 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 MTDHQ86UE4 582 aaKnown RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FUNDC1Q8IVP5 155 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF595Q8IYB9 648 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 DTWD1Q8N5C7 304 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 NATD1Q8N6N6 113 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 OR8J2Q8NGG1 315 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms