RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RASSF1Q9NS23 344 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 TAAR2Q9P1P5 351 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 AASSQ9UDR5 926 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 ADAM29Q9UKF5 820 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 ITM2BQ9Y287 266 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 TDRKHQ9Y2W6 561 aaKnown RBP11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 TCF20Q9UGU0 1960 aaKnown RBP11.96□□□□□ -0.5
ECHDC1-209ENST00000454591 EFCAB10A6NFE3 127 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 PLK4O00444 970 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 SERPINB7O75635 380 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 CCNB2O95067 398 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ADAP00813 363 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TGFB1P01137 390 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 IL3P08700 152 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ADRB3P13945 408 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 DDCP20711 480 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 CDH3P22223 829 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 NR4A1P22736 598 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 LIPAP38571 399 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 SLC15A1P46059 708 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 CDH12P55289 794 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 NCS1P62166 190 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TRA2BP62995 288 aaKnown RBP11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 CDC20Q12834 499 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ELAVL3Q14576 367 aaKnown RBP11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 STARD3Q14849 445 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 INAQ16352 499 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 LRRC26Q2I0M4 334 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 GAB4Q2WGN9 574 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TRIM16LQ309B1 348 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TMEM201Q5SNT2 666 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 RNLSQ5VYX0 342 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 USP43Q70EL4 1123 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF367Q7RTV3 350 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 RNF130Q86XS8 419 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TRAPPC5Q8IUR0 188 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 IL17RCQ8NAC3 791 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 SPPL3Q8TCT6 385 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 CIDECQ96AQ7 238 aaPredicted RBP11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ZHX1-C8orf76Q96EF9 292 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 QRFPRQ96P65 431 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 FAM129BQ96TA1 746 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 MS4A8Q9BY19 250 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 HDAC8Q9BY41 377 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ALOXE3Q9BYJ1 711 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 NLNQ9BYT8 704 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 DSN1Q9H410 356 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF556Q9HAH1 456 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 FZD3Q9NPG1 666 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 IRAK4Q9NWZ3 460 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 TAS2R7Q9NYW3 318 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 FAM8A1Q9UBU6 413 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 HCFC2Q9Y5Z7 792 aa11.95□□□□□ -0.5
ECHDC1-209ENST00000454591 PRAMEF33A0A0G2JMD5 474 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 SAGE2PA6NJ88 616 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 ZSCAN9O15535 394 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 MAN1A2O60476 641 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 PRAMEF10O60809 474 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 PDE9AO76083 593 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 GADD45GO95257 159 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 TBX6O95947 436 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 VIPP01282 170 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 RPN2P04844 631 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 KLK1P06870 262 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 CEBPBP17676 345 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 CHMP24386 653 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 TEAD1P28347 426 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 AQP1P29972 269 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 PCBP4P57723 403 aaKnown RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 CDC42P60953 191 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 SNRPGP62308 76 aaKnown RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 REEP5Q00765 189 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 ATP1A4Q13733 1029 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 AGERQ15109 404 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 AGAP7PQ5VUJ5 663 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 KHDRBS2Q5VWX1 349 aaKnown RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 RAET1GQ6H3X3 334 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 PLD3Q8IV08 490 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 KBTBD8Q8NFY9 601 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 SNRNP27Q8WVK2 155 aaKnown RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF707Q96C28 371 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 LRRC3BQ96PB8 259 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 TMEM245Q9H330 911 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 CXorf36Q9H7Y0 433 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 ACSS1Q9NUB1 689 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 DAPK2Q9UIK4 370 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 ACAD8Q9UKU7 415 aa11.94□□□□□ -0.5
ECHDC1-209ENST00000454591 TRBC2A0A5B9 178 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 GPR89AB7ZAQ6 455 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms