RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PGDP52209 483 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 PDX1P52945 283 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 PITX1P78337 314 aaPredicted RBP11.6□□□□□ -0.55
SEC16A-207ENST00000453963 FAM189A2Q15884 450 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 EXOC3L2Q2M3D2 409 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 DCDC5Q6ZRR9 648 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 MSANTD1Q6ZTZ1 278 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 ISCA2Q86U28 154 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 LSM14AQ8ND56 463 aaKnown RBP11.6□□□□□ -0.55
SEC16A-207ENST00000453963 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 ZNF778Q96MU6 729 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 TDP1Q9NUW8 608 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 STUB1Q9UNE7 303 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 SMIM30A4D0T7 59 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 SORBS2O94875 1100 aaKnown RBP11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CKMT1AP12532 417 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CAPN3P20807 821 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 FSHRP23945 695 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 DNASE1P24855 282 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 GMPRP36959 345 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 MAGEA11P43364 429 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CDKN2DP55273 166 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 PUM1Q14671 1186 aaKnown RBP eCLIP11.6□□□□□ -0.556e-6■■□□□ 13.7
SEC16A-207ENST00000453963 HSDL2Q6YN16 418 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
SEC16A-207ENST00000453963 FBXO15Q8NCQ5 510 aaPredicted RBP11.6□□□□□ -0.55
SEC16A-207ENST00000453963 OR4K1Q8NGD4 311 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CRYGNQ8WXF5 182 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 TREM1Q9NP99 234 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 CLDND1Q9NY35 253 aa11.6□□□□□ -0.55
SEC16A-207ENST00000453963 C2orf92A0A1B0GVN3 265 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 KRBA1A5PL33 1030 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 SLC16A5O15375 505 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 GDI1P31150 447 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 BDKRB1P46663 353 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CDKL1Q00532 357 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 GPRC6AQ5T6X5 926 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CMTM8Q8IZV2 173 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 KLK6Q92876 244 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ADAD1Q96M93 576 aaKnown RBP11.59□□□□□ -0.55
SEC16A-207ENST00000453963 C16orf70Q9BSU1 422 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 NENFQ9UMX5 172 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 B3GNT3Q9Y2A9 372 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 HTR3EA5X5Y0 456 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 GNB5O14775 395 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 RP2O75695 350 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 RETP07949 1114 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ACP5P13686 325 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ANKRD26P1Q6NSI1 321 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ZNF767PQ75MW2 155 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 IGFN1Q86VF2 1251 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CARM1Q86X55 608 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 PCYT2Q99447 389 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CARS2Q9HA77 564 aaKnown RBP11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ERVK13-1Q9NX77 482 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 GABRQQ9UN88 632 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CNTRLQ7Z7A1 2325 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 MTMR11A4FU01 709 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ZSCAN5BA6NJL1 495 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 RHCEP18577 417 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 MC1RQ01726 317 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ABRAXAS2Q15018 415 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ZNF227Q86WZ6 799 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CCDC54Q8NEL0 328 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CHMP1AQ9HD42 196 aaPredicted RBP11.59□□□□□ -0.55
SEC16A-207ENST00000453963 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
SEC16A-207ENST00000453963 TAC3Q9UHF0 121 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 ENPP5Q9UJA9 477 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 RIMS3Q9UJD0 308 aa11.59□□□□□ -0.55
SEC16A-207ENST00000453963 OXSR1O95747 527 aaPredicted RBP11.58□□□□□ -0.55
SEC16A-207ENST00000453963 PDYNP01213 254 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 NFATC2Q13469 925 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 TOR1AIP1Q5JTV8 583 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 BAIAP2L2Q6UXY1 529 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 PAPD5Q8NDF8 572 aaKnown RBP11.58□□□□□ -0.55
SEC16A-207ENST00000453963 DENND6BQ8NEG7 585 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 PROKR2Q8NFJ6 384 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 BBS10Q8TAM1 723 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 OR5P2Q8WZ92 322 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 COQ8BQ96D53 544 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 SCRN2Q96FV2 425 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 BEX2Q9BXY8 128 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 B3GNT4Q9C0J1 378 aa11.58□□□□□ -0.55
SEC16A-207ENST00000453963 ROBO1Q9Y6N7 1651 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 C12orf71A8MTZ7 269 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 SCAMP1O15126 338 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 SOCS5O75159 536 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 HAPLN1P10915 354 aaPredicted RBP11.58□□□□□ -0.56
SEC16A-207ENST00000453963 CEBPGP53567 150 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 INHBCP55103 352 aa11.58□□□□□ -0.56
SEC16A-207ENST00000453963 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms