RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 CCT8L2Q96SF2 557 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 SIKE1Q9BRV8 207 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 CD244Q9BZW8 370 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 C20orf27Q9GZN8 174 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 OPTCQ9UBM4 332 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 C19orf25Q9UFG5 118 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 NTNG1Q9Y2I2 539 aa16.99■□□□□ 0.31
SQSTM1-204ENST00000453046 SPTBN1Q01082 2364 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 LOC102723996A0A087X1L8 192 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 K7EPI3 171 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 OR1F1O43749 312 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 JRKO75564 520 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 CHRNGP07510 517 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 XCR1P46094 333 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 MEF2AQ02078 507 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 CLCQ05315 142 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 PCOLCEQ15113 449 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 TMEM205Q6UW68 189 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 RIPOR1Q6ZS17 1223 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 MFSD9Q8NBP5 474 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 KCT2Q8NC54 265 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 OR56A3Q8NH54 315 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 PIWIL2Q8TC59 973 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 TM4SF19Q96DZ7 209 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 ZNF382Q96SR6 550 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 TUBB6Q9BUF5 446 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 VN1R1Q9GZP7 353 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 FAM107BQ9H098 131 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 ZNF700Q9H0M5 742 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 ASB1Q9Y576 335 aa16.98■□□□□ 0.31
SQSTM1-204ENST00000453046 A0A1W2PQ72 361 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 LRRC14BA6NHZ5 514 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 NDUFAB1O14561 156 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 NDUFS4O43181 175 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 DDAH2O95865 285 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 SERPIND1P05546 499 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 CELA2AP08217 269 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 GTF2H2Q13888 395 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 TERF2Q15554 542 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 CGB2Q6NT52 195 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 GTF2H2CQ6P1K8 395 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 FAM180AQ6UWF9 173 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 GOLGA7Q7Z5G4 137 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 AFAP1L2Q8N4X5 818 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 ABHD11Q8NFV4 315 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 BCAS4Q8TDM0 211 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 GRHL3Q8TE85 626 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 PSMF1Q92530 271 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 MAGEB10Q96LZ2 347 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 NSUN5Q96P11 429 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.97■□□□□ 0.317e-10■■□□□ 12.9
SQSTM1-204ENST00000453046 ZNF395Q9H8N7 513 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 PLA2G3Q9NZ20 509 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 PLEKHB1Q9UF11 243 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 NAALAD2Q9Y3Q0 740 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 DYRK1BQ9Y463 629 aa16.97■□□□□ 0.31
SQSTM1-204ENST00000453046 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 RDH16O75452 317 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 WDR47O94967 919 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 CYC1P08574 325 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ITGAMP11215 1152 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 SOX11P35716 441 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 CDH13P55290 713 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 PKNOX1P55347 436 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 HERC3Q15034 1050 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ZXDCQ2QGD7 858 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 C18orf21Q32NC0 220 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 FBXO48Q5FWF7 155 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 CATSPEREQ5SY80 951 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 SPATA21Q7Z572 469 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 CPEB2Q7Z5Q1 589 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 HOMEZQ8IX15 550 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ZNF781Q8N8C0 355 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ST6GALNAC3Q8NDV1 305 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 AGAP11Q8TF27 550 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ZNF473Q8WTR7 871 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 FAR1Q8WVX9 515 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 SLC5A11Q8WWX8 675 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ESAMQ96AP7 390 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 MOCOSQ96EN8 888 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 FAR2Q96K12 515 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 OR4K3Q96R72 315 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 BARD1Q99728 777 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ZBTB26Q9HCK0 441 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 SEMA4BQ9NPR2 832 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 DNAJC11Q9NVH1 559 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 KLHL14Q9P2G3 628 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 TEKT2Q9UIF3 430 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 SLC22A7Q9Y694 548 aa16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 UTP20O75691 2785 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-204ENST00000453046 TRAV17A0A0B4J275 112 aa16.95■□□□□ 0.3
SQSTM1-204ENST00000453046 IGHV3-20A0A0C4DH32 117 aa16.95■□□□□ 0.3
SQSTM1-204ENST00000453046 TRBC2A0A5B9 178 aa16.95■□□□□ 0.3
SQSTM1-204ENST00000453046 ZNF860A6NHJ4 632 aa16.95■□□□□ 0.3
SQSTM1-204ENST00000453046 SLCO1B7G3V0H7 640 aa16.95■□□□□ 0.3
SQSTM1-204ENST00000453046 SNX3O60493 162 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms