RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CITO14578 2027 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TRIP11Q15643 1979 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ZNF318Q5VUA4 2279 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ELOVL7A1L3X0 281 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ARL5CA6NH57 179 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 LACTBL1A8MY62 500 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 RGS14O43566 566 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 GPR137BO60478 399 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 NEMFO60524 1076 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PFKFB2O60825 505 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 STBD1O95210 358 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 LUC7L3O95232 432 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 GLUD1P00367 558 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 NGFRP08138 427 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 KRT19P08727 400 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 SAGP10523 405 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ACP2P11117 423 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 JAK1P23458 1154 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 C21orf33P30042 268 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 SLC6A6P31641 620 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PTGER4P35408 488 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 HSD17B3P37058 310 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 MAGEB1P43366 347 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 SLC11A1P49279 550 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 CLCN4P51793 760 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 VCPP55072 806 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ROR2Q01974 943 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 FUT11Q495W5 492 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 SYT14P1Q58G82 188 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TOR1AIP1Q5JTV8 583 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PRSS55Q6UWB4 352 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TMPRSS12Q86WS5 348 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 ZBTB8OSQ8IWT0 167 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 CFAP206Q8IYR0 622 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 KIAA0895Q8NCT3 520 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PRSS33Q8NF86 280 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 THAP6Q8TBB0 222 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 UBLCP1Q8WVY7 318 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 AP2M1Q96CW1 435 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 THOC1Q96FV9 657 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 CPB2Q96IY4 423 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TSGA13Q96PP4 275 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 NTPCRQ9BSD7 190 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 MMTAG2Q9BU76 263 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 DHX33Q9H6R0 707 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 HIF1ANQ9NWT6 349 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 COMMD8Q9NX08 183 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 C1RLQ9NZP8 487 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 EPS15L1Q9UBC2 864 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 SH3BGRL2Q9UJC5 107 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 MYO6Q9UM54 1294 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TDRKHQ9Y2W6 561 aaKnown RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PRG3Q9Y2Y8 225 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-202ENST00000452852 TMED3Q9Y3Q3 217 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 YIPF1Q9Y548 306 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 LRP12Q9Y561 859 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PTGDR2Q9Y5Y4 395 aa4.04□□□□□ -1.76
LINC00393-202ENST00000452852 PDCD11Q14690 1871 aaKnown RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DMDP11532 3685 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 RNF103-CHMP3A0A140T963 221 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 C13orf42A0A1B0GVH6 325 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 RGSL1A5PLK6 1076 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ARHGEF35A5YM69 484 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 GOLGA6L9A6NEM1 432 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 OR5K3A6NET4 321 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 LRRIQ4A6NIV6 560 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 H0YIG0 161 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 RNF103O00237 685 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 FLRT2O43155 660 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 EDIL3O43854 480 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SLC28A2O43868 658 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DDHD2O94830 711 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 GLCEO94923 617 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ALPPP05187 535 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 C8orf89P0DMQ9 161 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ALPPL2P10696 532 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 PLA2G2AP14555 144 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 S1PR1P21453 382 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 GLUD2P49448 558 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SMSP52788 366 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 RUNX1T1Q06455 604 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DMPKQ09013 629 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DHX34Q14147 1143 aaKnown RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 MAPK6Q16659 721 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 FAM174BQ3ZCQ3 159 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 KLHL22Q53GT1 634 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ZNF789Q5FWF6 425 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 KLC3Q6P597 504 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 BTNL8Q6UX41 500 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 PLXDC2Q6UX71 529 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 HDDC3Q8N4P3 179 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 BMPERQ8N8U9 685 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 NECAB1Q8N987 351 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 THAP8Q8NA92 274 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 CLEC1AQ8NC01 280 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ERMNQ8TAM6 284 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms