RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 MAGEA11P43364 429 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 TNFRSF4P43489 277 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 CLDN17P56750 224 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 HERV-K104P63124 156 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 HSF2Q03933 536 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 RABL6Q3YEC7 729 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 NADK2Q4G0N4 442 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 TMEM41BQ5BJD5 291 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 NKAIN2Q5VXU1 208 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 CEACAM20Q6UY09 585 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 C15orf52Q6ZUT6 534 aaKnown RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 PRUNE1Q86TP1 453 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 EID3Q8N140 333 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 CERS5Q8N5B7 392 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 FADS6Q8N9I5 356 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZNF383Q8NA42 475 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 UBTD2Q8WUN7 234 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 TMEM143Q96AN5 459 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 SENP5Q96HI0 755 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 TTC25Q96NG3 672 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZSCAN5AQ9BUG6 496 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 NACAP1Q9BZK3 213 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 NMNAT2Q9BZQ4 307 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 POLR1EQ9GZS1 481 aaKnown RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 GORASP2Q9H8Y8 452 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 RAVER2Q9HCJ3 691 aaKnown RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 HOMER3Q9NSC5 361 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 FARSBQ9NSD9 589 aaKnown RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 ACOXLQ9NUZ1 547 aa4.5□□□□□ -1.69
HMGB1P26-201ENST00000452520 A0A0U1RQV5 110 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 PMS2P5A8MQ11 134 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ERVV-2B6SEH9 535 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 EEF2KO00418 725 aaKnown RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZNF197O14709 1029 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ATP6V0E1O15342 81 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 MTX2O75431 263 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 VPS26AO75436 327 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 APOHP02749 345 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 HMBSP08397 361 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ERVK-10P10266 1014 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 EZRP15311 586 aaKnown RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 CYP3A5P20815 502 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 CA6P23280 308 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR3A3P47888 321 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 NLRP11P59045 1033 aaKnown RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 SNX1Q13596 522 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 SHROOM1Q2M3G4 852 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 CMPK2Q5EBM0 449 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 BNIPLQ7Z465 357 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ISCA2Q86U28 154 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 CCDC60Q8IWA6 550 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 CENPLQ8N0S6 344 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 PRSS35Q8N3Z0 413 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 TRPV3Q8NET8 790 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 TRIM58Q8NG06 486 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR10V1Q8NGI7 309 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR10T2Q8NGX3 314 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 RNF139Q8WU17 664 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 SEPT8Q92599 483 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 MAGED4Q96JG8 741 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 EDEM2Q9BV94 578 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 DPEP2Q9H4A9 486 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 FGF21Q9NSA1 209 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 TCF19Q9Y242 345 aa4.49□□□□□ -1.69
HMGB1P26-201ENST00000452520 ABCC4O15439 1325 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 C2orf81A6NN90 581 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 CCDC169A6NNP5 214 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FAM72CH0Y354 149 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 MAPK13O15264 365 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PCDH7O60245 1069 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GPRIN2O60269 458 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 NME2P1O60361 137 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 TSC22D2O75157 780 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 CSO75390 466 aaKnown RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 CLN5O75503 358 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 SYNGR4O95473 234 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ODC1P11926 461 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 KRT3P12035 628 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GNSP15586 552 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PRDX2P32119 198 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR1D2P34982 312 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PTGER3P43115 390 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 DHPSP49366 369 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 CLCN4P51793 760 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GEMP55040 296 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 MAZP56270 477 aaKnown RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 UBE2HP62256 183 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 MYBPC1Q00872 1141 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FUT7Q11130 342 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 KIAA1644Q3SXP7 199 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 SLC36A3Q495N2 470 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GPR33Q49SQ1 333 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 C20orf194Q5TEA3 1177 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FAM72AQ5TYM5 149 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms