RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CAMK4Q16566 473 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 PTGISQ16647 500 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TXNRD1Q16881 649 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 MOGAT2Q3SYC2 334 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SAPCD1Q5SSQ6 148 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPR157Q5UAW9 335 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 NKAIN2Q5VXU1 208 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SIGIRRQ6IA17 410 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 PYHIN1Q6K0P9 492 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CEP85Q6P2H3 762 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDHR3Q6ZTQ4 885 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 IL17RELQ6ZVW7 336 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CYP4V2Q6ZWL3 525 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SSX9Q7RTT3 188 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 IRF2BP2Q7Z5L9 587 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 PATL1Q86TB9 770 aaKnown RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRRC8AQ8IWT6 810 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADGRG5Q8IZF4 528 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 LCORLQ8N3X6 602 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM109AQ8N4B1 249 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM217Q8N7C4 229 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM83FQ8NEG4 500 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPRC5AQ8NFJ5 357 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 BEST2Q8NFU1 509 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR5T3Q8NGG3 340 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR1J2Q8NGS2 313 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR13C9Q8NGT0 318 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 M1APQ8TC57 530 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SCARB1Q8WTV0 552 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 SMG7Q92540 1137 aaKnown RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TANKQ92844 425 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TOP1MTQ969P6 601 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 REPS1Q96D71 796 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CERS2Q96G23 380 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF570Q96NI8 536 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 FOXN4Q96NZ1 517 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 FRG2BQ96QU4 278 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR6C1Q96RD1 312 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCT8L2Q96SF2 557 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OSBPL9Q96SU4 736 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CBWD1Q9BRT8 395 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TEKT3Q9BXF9 490 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACTRT3Q9BYD9 372 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 CENPHQ9H3R5 247 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACTL8Q9H568 366 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 RAB18Q9NP72 206 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 MRPL17Q9NRX2 175 aaKnown RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 C20orf96Q9NUD7 363 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TXLNGQ9NUQ3 528 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 TUBA8Q9NY65 449 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 EURLQ9NYK6 297 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 BCAP29Q9UHQ4 241 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 LCMT1Q9UIC8 334 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 OAZ3Q9UMX2 235 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPIL1Q9Y3C6 166 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 NR2E1Q9Y466 385 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 A3GALT2U3KPV4 340 aa4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 WDR33Q9C0J8 1336 aaKnown RBP4.16□□□□□ -1.74
HMGB3P21-201ENST00000452483 HEG1Q9ULI3 1381 aa4.15□□□□□ -1.74
HMGB3P21-201ENST00000452483 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A1B0GVL5 298 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 MEX3AA1L020 520 aaKnown RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM210A6NLX4 147 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 EIF4E1BA6NMX2 242 aaKnown RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 SNTNA6NMZ2 147 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 A8MU76 341 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 HEPACAM2A8MVW5 462 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 PATE3B3GLJ2 98 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 HAS3O00219 553 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 EIF3HO15372 352 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 PEX1O43933 1283 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 TIMM8AO60220 97 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NEBLO76041 1014 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 ERLIN2O94905 339 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 H6PDO95479 791 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZBTB11O95625 1053 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 BAG3O95817 575 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 CETPP11597 493 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NQO2P16083 231 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 SRD5A1P18405 259 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 TNNI1P19237 187 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 MSNP26038 577 aaKnown RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 ARRB2P32121 409 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 CYP2C18P33260 490 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NAA10P41227 235 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 GDI2P50395 445 aaKnown RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NR0B1P51843 470 aaKnown RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 THOP1P52888 689 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 RAD23BP54727 409 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDH6P55285 790 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 KCNK10P57789 538 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 HERV-K104P63124 156 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLOD1Q02809 727 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 MBTD1Q05BQ5 628 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 FADDQ13158 208 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NME3Q13232 169 aa4.15□□□□□ -1.75
HMGB3P21-201ENST00000452483 NFYCQ13952 458 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms