RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZNF595Q8IYB9 648 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 SREK1Q8WXA9 508 aaKnown RBP25.26■■□□□ 1.63
USP42-204ENST00000451154 CDKL2Q92772 493 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 SERINC2Q96SA4 455 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 CCDC77Q9BR77 488 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 CD274Q9NZQ7 290 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 RNF14Q9UBS8 474 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 MRPS33Q9Y291 106 aaKnown RBP25.26■■□□□ 1.63
USP42-204ENST00000451154 ZNF407Q9C0G0 2248 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 A0A1B0GTH9 108 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 ZFAND5O76080 213 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 STMN1P16949 149 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 CD22P20273 847 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 GMPRP36959 345 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 KCNC1P48547 511 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 GPR85P60893 370 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 ILF2Q12905 390 aaKnown RBP25.25■■□□□ 1.63
USP42-204ENST00000451154 BMPR2Q13873 1038 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 CDKL4Q5MAI5 379 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 C3orf62Q6ZUJ4 267 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 PTCD3Q96EY7 689 aaKnown RBP25.25■■□□□ 1.63
USP42-204ENST00000451154 GPR22Q99680 433 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 CPNE1Q99829 537 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 ERP44Q9BS26 406 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 ADAP2Q9NPF8 381 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 PRDM7Q9NQW5 492 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 PTBP2Q9UKA9 531 aaKnown RBP25.25■■□□□ 1.63
USP42-204ENST00000451154 PYCARDQ9ULZ3 195 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 DAPP1Q9UN19 280 aa25.25■■□□□ 1.63
USP42-204ENST00000451154 YARS2Q9Y2Z4 477 aaKnown RBP25.25■■□□□ 1.63
USP42-204ENST00000451154 POLQO75417 2590 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 TCRBV9S1A1TA0A576 114 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 TMEM200CA6NKL6 621 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 E9PLN8 166 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 HS6ST1O60243 411 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 CDC40O60508 579 aaKnown RBP eCLIP25.24■■□□□ 1.63
USP42-204ENST00000451154 IFNA16P05015 189 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 ELAVL4P26378 380 aaKnown RBP25.24■■□□□ 1.63
USP42-204ENST00000451154 HPDP32754 393 aaPredicted RBP25.24■■□□□ 1.63
USP42-204ENST00000451154 KIR3DL1P43629 444 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 SSR4P51571 173 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 MTTPP55157 894 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 ATP6V0D1P61421 351 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 CALCOCO2Q13137 446 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 PDK4Q16654 411 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 WDR34Q96EX3 536 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 DMRTA2Q96SC8 542 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 RBBP8Q99708 897 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 VKORC1Q9BQB6 163 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 TRIM8Q9BZR9 551 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 COPS7BQ9H9Q2 264 aaPredicted RBP25.24■■□□□ 1.63
USP42-204ENST00000451154 KCMF1Q9P0J7 381 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 WHRNQ9P202 907 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 DNAJC13O75165 2243 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 EML6Q6ZMW3 1958 aa25.24■■□□□ 1.63
USP42-204ENST00000451154 CCNT2O60583 730 aaKnown RBP25.23■■□□□ 1.63
USP42-204ENST00000451154 CTNSO60931 367 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 OR2J2O76002 312 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 PTGS2P35354 604 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 UBE3DQ7Z6J8 389 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 ZNF295-AS1Q8N0V1 137 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 TMEM132CQ8N3T6 1108 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 C16orf52Q8NHV5 167 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 EXT2Q93063 718 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 KIAA1191Q96A73 305 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 UBXN10Q96LJ8 280 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 ALOXE3Q9BYJ1 711 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 RNF112Q9ULX5 631 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 ERVK-11Q9UQG0 969 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 HRH3Q9Y5N1 445 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 CLCA3PQ9Y6N3 262 aa25.23■■□□□ 1.63
USP42-204ENST00000451154 FAM187AA6NFU0 413 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 FAM159BA6NKW6 160 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 EIF3HO15372 352 aaKnown RBP eCLIP25.22■■□□□ 1.63
USP42-204ENST00000451154 PDE9AO76083 593 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 EPORP19235 508 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 GP5P40197 560 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 GPX6P59796 221 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 IRF8Q02556 426 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 CHIT1Q13231 466 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 ELAVL1Q15717 326 aaKnown RBP25.22■■□□□ 1.63
USP42-204ENST00000451154 HIST2H2ACQ16777 129 aaPredicted RBP25.22■■□□□ 1.63
USP42-204ENST00000451154 CMPK2Q5EBM0 449 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 HIST2H2AA3Q6FI13 130 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 CYS1Q717R9 158 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 ZFP62Q8NB50 900 aaPredicted RBP25.22■■□□□ 1.63
USP42-204ENST00000451154 PDPRQ8NCN5 879 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 OR52N2Q8NGI0 321 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 PHF10Q8WUB8 498 aaKnown RBP25.22■■□□□ 1.63
USP42-204ENST00000451154 PTPMT1Q8WUK0 201 aaPredicted RBP25.22■■□□□ 1.63
USP42-204ENST00000451154 EFCAB11Q9BUY7 163 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 TIMMDC1Q9NPL8 285 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 PPT2Q9UMR5 302 aa25.22■■□□□ 1.63
USP42-204ENST00000451154 WWP2O00308 870 aa25.21■■□□□ 1.63
USP42-204ENST00000451154 RAD51CO43502 376 aa25.21■■□□□ 1.63
USP42-204ENST00000451154 SH3BGRLO75368 114 aa25.21■■□□□ 1.63
USP42-204ENST00000451154 FAM155BO75949 473 aa25.21■■□□□ 1.63
USP42-204ENST00000451154 S100BP04271 92 aaPredicted RBP25.21■■□□□ 1.63
USP42-204ENST00000451154 TPOP07202 933 aa25.21■■□□□ 1.63
USP42-204ENST00000451154 TFEBP19484 476 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms