RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CD93Q9NPY3 652 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TXNL4BQ9NX01 149 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 KCTD5Q9NXV2 234 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 MPP6Q9NZW5 540 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 COMMD3Q9UBI1 195 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 MLXQ9UH92 298 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 PLCL2Q9UPR0 1127 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 PADI2Q9Y2J8 665 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 PCDHGA2Q9Y5H1 932 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 KIAA1217Q5T5P2 1943 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 A0A1B0GVI7 797 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 OR51F1A6NGY5 319 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 I6L893 689 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 PDCD5O14737 125 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SELENOFO60613 162 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 NDUFS6O75380 124 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 CSO75390 466 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 CCNB2O95067 398 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 FABP1P07148 127 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 FGF2P09038 288 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 STAG3L1P0CL83 205 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CKMT1AP12532 417 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 HOXB8P17481 243 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 HLA-FP30511 346 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CAPZA2P47755 286 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 RPL34P49207 117 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 SUOXP51687 545 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 HK3P52790 923 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ATP12AP54707 1039 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CYP4F8P98187 520 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TMEM132DQ14C87 1099 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SLC39A12Q504Y0 691 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 C22orf42Q6IC83 251 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 USP45Q70EL2 814 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 METTL23Q86XA0 190 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 C1orf52Q8N6N3 182 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 OR52B6Q8NGF0 335 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 METTL6Q8TCB7 284 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 ESAMQ96AP7 390 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 KLRG1Q96E93 195 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 MFSD1Q9H3U5 465 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ABHD16BQ9H3Z7 469 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ZFR2Q9UPR6 939 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 NME7Q9Y5B8 376 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TCRBV16S1A1N1A0A5B0 115 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FAM74A7A6NL05 159 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 DPM1O60762 260 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 APOC3P02656 99 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 HAPLN1P10915 354 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 PTBP1P26599 531 aaKnown RBP eCLIP8.26□□□□□ -1.09
LSM5-208ENST00000450169 AIF1P55008 147 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 VSX2P58304 361 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 ERVPABLB-1P60509 514 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CACNB2Q08289 660 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 ADIGQ0VDE8 80 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 GPR176Q14439 515 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 PTPRRQ15256 657 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 MPEG1Q2M385 716 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 PLA1AQ53H76 456 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 LIPKQ5VXJ0 399 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 OVOS1Q6IE37 1185 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ZNF730Q6ZMV8 503 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 DBX2Q6ZNG2 339 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 SLC5A8Q8N695 610 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 KRTCAP2Q8N6L1 136 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 BVESQ8NE79 360 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 DNAJB8Q8NHS0 232 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 NTAN1Q96AB6 310 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ARMC5Q96C12 935 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 SLC38A2Q96QD8 506 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ZIC5Q96T25 663 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 BCL2L14Q9BZR8 327 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 POLR2J2Q9GZM3 115 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 TINAGL1Q9GZM7 467 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 DERL2Q9GZP9 239 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 OR51J1Q9H342 316 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CTSFQ9UBX1 484 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 EIF2B4Q9UI10 523 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 PCOLCE2Q9UKZ9 415 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 SLC6A14Q9UN76 642 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 EDARQ9UNE0 448 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 POFUT2Q9Y2G5 429 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 NUP205Q92621 2012 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 MPTX1A8MV57 137 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 J3KR12 359 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 AIPO00170 330 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CDC7O00311 574 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 E2F3O00716 465 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 GNB5O14775 395 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ECDO95905 644 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 LPLP06858 475 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms