RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 TBPL1P62380 186 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 ZNF33BQ06732 778 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 ZNF763Q0D2J5 394 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 GPR50Q13585 617 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 PDE7AQ13946 482 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 SPIN4Q56A73 249 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 SPANXN2Q5MJ10 180 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 HTR3DQ70Z44 454 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 RBM45Q8IUH3 476 aaKnown RBP13.05□□□□□ -0.32
POLR1B-209ENST00000448770 UBQLNLQ8IYU4 475 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 CELF5Q8N6W0 485 aaKnown RBP13.05□□□□□ -0.32
POLR1B-209ENST00000448770 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 CRELD1Q96HD1 420 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 SLC30A2Q9BRI3 323 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 FAM83DQ9H4H8 585 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 TMEM38AQ9H6F2 299 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 ENPP4Q9Y6X5 453 aa13.05□□□□□ -0.32
POLR1B-209ENST00000448770 SLC5A10A0PJK1 596 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 RGS13O14921 159 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 OR2B6P58173 313 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 RACK1P63244 317 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 KCNC3Q14003 757 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 E2F2Q14209 437 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 SLBPQ14493 270 aaKnown RBP eCLIP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 FLYWCH1Q4VC44 716 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 TPGS2Q68CL5 300 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 TMC5Q6UXY8 1006 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 KLHDC8AQ8IYD2 350 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 OR4D11Q8NGI4 311 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 OR2A12Q8NGT7 310 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 C16orf78Q8WTQ4 265 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 VPS35Q96QK1 796 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 ASPNQ9BXN1 380 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 SLAMF7Q9NQ25 335 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 MKLN1Q9UL63 735 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 NINQ8N4C6 2090 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 LINC00854A0A1B0GVQ3 168 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 GPR37L1O60883 481 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 SOD2P04179 222 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 ARAFP10398 606 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 PCSK2P16519 638 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 SOAT1P35610 550 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 CRYBB2P43320 205 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 PRIM2P49643 509 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 TAS2R50P59544 299 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 C2orf80Q0P641 193 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 COMTD1Q86VU5 262 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 TMEM25Q86YD3 366 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 OR8H2Q8N162 312 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 CPXM2Q8N436 756 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 SORCS1Q8WY21 1168 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 CPEB1Q9BZB8 566 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 ABCG4Q9H172 646 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 CXorf36Q9H7Y0 433 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 EXOSC4Q9NPD3 245 aaKnown RBP13.04□□□□□ -0.32
POLR1B-209ENST00000448770 FZD3Q9NPG1 666 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 DMRT3Q9NQL9 472 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 CFL2Q9Y281 166 aa13.04□□□□□ -0.32
POLR1B-209ENST00000448770 RFXAPO00287 272 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 CAPN5O15484 640 aaPredicted RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 B4GALT2O60909 372 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 NPPBP16860 134 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 CDC42P60953 191 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 OLR1P78380 273 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 MADCAM1Q13477 382 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 STARD3Q14849 445 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 TOR1AIP1Q5JTV8 583 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 TMEM215Q68D42 235 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 MED27Q6P2C8 311 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 DMRTB1Q96MA1 342 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 TRNT1Q96Q11 434 aaKnown RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 ZNF556Q9HAH1 456 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 CNOT2Q9NZN8 540 aaKnown RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 KCND3Q9UK17 655 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 AP1M2Q9Y6Q5 423 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 A0A075B6Q4 140 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 EFCAB10A6NFE3 127 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 A8MVJ9 347 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms