RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MANEALQ5VSG8 457 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 FAM72DQ6L9T8 149 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 DEF8Q6ZN54 512 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 LANCL3Q6ZV70 420 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 USP43Q70EL4 1123 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF572Q7Z3I7 529 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 LRRTM4Q86VH4 590 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 FAM72BQ86X60 149 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 CCDC150Q8NCX0 1101 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 LILRB1Q8NHL6 650 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 GPT2Q8TD30 523 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 FAM210AQ96ND0 272 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 MED15Q96RN5 788 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 NAA15Q9BXJ9 866 aaKnown RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 SLITRK2Q9H156 845 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 SRMSQ9H3Y6 488 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 LDAHQ9H6V9 325 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 EXO5Q9H790 373 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ZDHHC11Q9H8X9 412 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 EURLQ9NYK6 297 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 UBA2Q9UBT2 640 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF282Q9UDV7 671 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF407Q9C0G0 2248 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 HERC1Q15751 4861 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 A0A0G2JMM0 328 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 A0A1W2PPB8 328 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 A0A1W2PRS3 328 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 OR2W5A6NFC9 320 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 KIR3DP1A8MWS1 328 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 DIRC3C9JPN6 131 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 M0QZ24 198 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 NDC80O14777 642 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TPD52L2O43399 206 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 FRS3O43559 492 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ERN1O75460 977 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 SLC25A14O95258 325 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CLDN7O95471 211 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 GASTP01350 101 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CD8AP01732 235 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 IGHG3P01860 377 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CD48P09326 243 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 RBP3P10745 1247 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF37AP17032 561 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 MDKP21741 143 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ENPP1P22413 925 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CALRP27797 417 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CRHR1P34998 444 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 OPRM1P35372 400 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TIMP3P35625 211 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 GRIA3P42263 894 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PRCPP42785 496 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CSNK1DP48730 415 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ARSFP54793 590 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 UBA52P62987 128 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 AP2B1P63010 937 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CUL2Q13617 745 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ADRM1Q16186 407 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 KNOP1Q1ED39 458 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 ACSF3Q4G176 576 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 RAB6CQ53S08 254 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 BRMS1LQ5PSV4 323 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 RRAGBQ5VZM2 374 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PLAG1Q6DJT9 500 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TRIM65Q6PJ69 517 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM205Q6UW68 189 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM110Q86TL2 294 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 RPS19BP1Q86WX3 136 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 KIF2BQ8N4N8 673 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM251Q8N6I4 163 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 SMAP2Q8WU79 429 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 LCN9Q8WX39 176 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 MAML1Q92585 1016 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 SARAFQ96BY9 339 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 SCRN2Q96FV2 425 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 CCDC138Q96M89 665 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 C12orf66Q96MD2 445 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 COL21A1Q96P44 957 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 DUX5Q96PT3 197 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 TIMM29Q9BSF4 260 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PANK2Q9BZ23 570 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 WWP1Q9H0M0 922 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 RAB6CQ9H0N0 254 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 KIR3DX1Q9H7L2 352 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 KIAA1257Q9ULG3 409 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PCDHA7Q9UN72 937 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PLCL2Q9UPR0 1127 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 MAPRE3Q9UPY8 281 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 B3GALT5Q9Y2C3 310 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 PPIAL4AQ9Y536 164 aa4.49□□□□□ -1.69
SDCBP-205ENST00000447267 YLPM1P49750 1951 aaKnown RBP4.49□□□□□ -1.69
SDCBP-205ENST00000447267 IGHV4-61A0A0C4DH41 118 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 GTPBP10A4D1E9 387 aaKnown RBP4.48□□□□□ -1.69
SDCBP-205ENST00000447267 MGST3O14880 152 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 KPNA5O15131 536 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 SOCS5O75159 536 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 DAB1O75553 588 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 PYGLP06737 847 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 PAEPP09466 180 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 OMGP23515 440 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms