RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 Q8N1Y9 231 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 BANPQ8N9N5 519 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 C9orf106Q8NAJ2 232 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 LILRB1Q8NHL6 650 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 ZNF653Q96CK0 615 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 TMX3Q96JJ7 454 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 FAM173AQ9BQD7 235 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SSBP3Q9BWW4 388 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 GPR63Q9BZJ6 419 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ACBD3Q9H3P7 528 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PIGMQ9H3S5 423 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 DHX35Q9H5Z1 703 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 CALHM2Q9HA72 323 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ACKR4Q9NPB9 350 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CWC15Q9P013 229 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 POLG2Q9UHN1 485 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SMC3Q9UQE7 1217 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 RUVBL1Q9Y265 456 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 SPO11Q9Y5K1 396 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MAGED1Q9Y5V3 778 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 X6R8D5 127 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MED12LQ86YW9 2145 aa2.96□□□□□ -1.93
PMS1-215ENST00000447232 TENM2Q9NT68 2774 aa2.96□□□□□ -1.93
PMS1-215ENST00000447232 A0A0A6YYC8 382 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 A0A0J9YVX5 310 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FRG2CA6NGY1 282 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TRIM77I1YAP6 450 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 I3L1I5 382 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 TBX1O43435 398 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FKBP9O95302 570 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 YEATS4O95619 227 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PLATP00750 562 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 EIF2S1P05198 315 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 HLA-DQB2P05538 268 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 SLC9A1P19634 815 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CNR1P21554 472 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 USF1P22415 310 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZFP36P26651 326 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 AKT1P31749 480 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 UGT2B10P36537 528 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZNF135P52742 658 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 BPIFB4P59827 614 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 IRX6P78412 446 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 RHAGQ02094 409 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ITGA9Q13797 1035 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FAM53BQ14153 422 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TYSND1Q2T9J0 566 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 MROH9Q5TGP6 573 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZDHHC20Q5W0Z9 365 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FAM151BQ6UXP7 276 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 USP43Q70EL4 1123 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 GPALPP1Q8IXQ4 340 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TMEM156Q8N614 296 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PLPP5Q8NEB5 264 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 NFAM1Q8NET5 270 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 OR5K2Q8NHB8 316 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 AKAP1Q92667 903 aaKnown RBP eCLIP2.96□□□□□ -1.94
PMS1-215ENST00000447232 PROX1Q92786 737 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FATE1Q969F0 183 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CAVIN3Q969G5 261 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CCDC47Q96A33 483 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 SLC22A18Q96BI1 424 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ANKRD9Q96BM1 317 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 ANAPC16Q96DE5 110 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 MRRFQ96E11 262 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 HS6ST2Q96MM7 605 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZFP3Q96NJ6 502 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PEBP4Q96S96 227 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TIMP4Q99727 224 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TSG101Q99816 390 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 SNRNP25Q9BV90 132 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 C1QTNF3Q9BXJ4 246 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 DRC3Q9H069 523 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PDCL3Q9H2J4 239 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZNF703Q9H7S9 590 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 SEMA4BQ9NPR2 832 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZNHIT6Q9NWK9 470 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 ARL15Q9NXU5 204 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PLAGL1Q9UM63 463 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PCDHA13Q9Y5I0 950 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PRR14LQ5THK1 2151 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 GLYATL1P3A0A0U1RQE8 302 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 MROH6A6NGR9 719 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 SIGLEC16A6NMB1 481 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 AGAP14A8MT82 685 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 MAGEB17A8MXT2 336 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 G3V3Y1 287 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 H0YGG7 62 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 H0YIG0 161 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZNF354AO60765 605 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 RCBTB2O95199 551 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 AP2A1O95782 977 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CD8AP01732 235 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CPOXP36551 454 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CD79BP40259 229 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 BCL6P41182 706 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ARF3P61204 181 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 ACTN3Q08043 901 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 LGALS3BPQ08380 585 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FOXL1Q12952 345 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms