RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 VTCN1Q7Z7D3 282 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 DCP2Q8IU60 420 aaKnown RBP17.95■□□□□ 0.46
SHANK3-203ENST00000445220 OR51G2Q8NGK0 314 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 OR8S1Q8NH09 359 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 SUSD3Q96L08 255 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 MYNNQ9NPC7 610 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 KCNE1P15382 129 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 EVI2BP34910 448 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 TRAM2Q15035 370 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 TMEM69Q5SWH9 247 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 AGAP6Q5VW22 663 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 OR2T35Q8NGX2 323 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 ACDQ96AP0 544 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 AGAP4Q96P64 663 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 LRP6O75581 1613 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 B8ZZF3 427 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 FAAHO00519 579 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 GMFGO60234 142 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 KLK1P06870 262 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 KDELR2P33947 212 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 GALNT2Q10471 571 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 C11orf91Q3C1V1 193 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 PIWIL3Q7Z3Z3 882 aaKnown RBP17.95■□□□□ 0.46
SHANK3-203ENST00000445220 FAM109AQ8N4B1 249 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 OR2S2Q9NQN1 319 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 RNF11Q9Y3C5 154 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.95■□□□□ 0.46
SHANK3-203ENST00000445220 HMX3A6NHT5 357 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 TUBG1P23258 451 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 OR1E2P47887 323 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 CRISP1P54107 249 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 CD47Q08722 323 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 TECRLQ5HYJ1 363 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 SLC27A4Q6P1M0 643 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 MTFR2Q6P444 385 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 NDNFQ8TB73 568 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 ZNF649Q9BS31 505 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 BCAS3Q9H6U6 928 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 S100PP25815 95 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 OLIG2Q13516 323 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CHRDL2Q6WN34 429 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 TMCO2Q7Z6W1 182 aaPredicted RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 GRHL3Q8TE85 626 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 DDX1Q92499 740 aaKnown RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 RGMAQ96B86 450 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 PIP5K1AQ99755 562 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 STYXL1Q9Y6J8 313 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 TEX13CA0A0J9YWL9 993 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 LRRTM2O43300 516 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 B3GALT2O43825 422 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CAP1Q01518 475 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 KRBOX4Q5JUW0 171 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 ARL14EPQ8N8R7 260 aaPredicted RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 DBF4BQ8NFT6 615 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 FARS2O95363 451 aaKnown RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CLUP10909 449 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CA5AP35218 305 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 HSD17B2P37059 387 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 RBMXP38159 391 aaKnown RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 GDF5P43026 501 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 EXOC3L2Q2M3D2 409 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 SLC22A10Q63ZE4 541 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 EIF5A2Q9GZV4 153 aaKnown RBP17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.94■□□□□ 0.467e-7■■■■□ 20.3
SHANK3-203ENST00000445220 ADH6P28332 368 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 GPR68Q15743 365 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 CEACAM19Q7Z692 300 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 SLC22A15Q8IZD6 547 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 OR8K5Q8NH50 307 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 ZCCHC10Q8TBK6 192 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 ZFP90Q8TF47 636 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 ZNF597Q96LX8 424 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 NEDD4LQ96PU5 975 aa17.94■□□□□ 0.46
SHANK3-203ENST00000445220 SLC33A1O00400 549 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-203ENST00000445220 RAB3BP20337 219 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 TUBB3Q13509 450 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 BCL2L15Q5TBC7 163 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 SLC39A4Q6P5W5 647 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 FAM129CQ86XR2 697 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 FBXO27Q8NI29 283 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 KCNN1Q92952 543 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 PEX13Q92968 403 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 UTP4Q969X6 686 aaKnown RBP17.93■□□□□ 0.46
SHANK3-203ENST00000445220 RAD9AQ99638 391 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 OAZ2O95190 189 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 PAPD5Q8NDF8 572 aaKnown RBP17.93■□□□□ 0.46
SHANK3-203ENST00000445220 WFIKKN2Q8TEU8 576 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 NSUN3Q9H649 340 aaKnown RBP17.93■□□□□ 0.46
SHANK3-203ENST00000445220 UBXN7O94888 489 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 C6orf47O95873 294 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 SLC6A6P31641 620 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 CCR8P51685 355 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 MS4A2Q01362 244 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 SP2Q02086 613 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 GTF2IRD2BQ6EKJ0 949 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 GTF2IRD2Q86UP8 949 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 SLC29A1Q99808 456 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 MYOCQ99972 504 aa17.93■□□□□ 0.46
SHANK3-203ENST00000445220 EPHX1P07099 455 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms