RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 VLDLRP98155 873 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 CACYBPQ9HB71 228 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 PIN4Q9Y237 131 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 PRELID3BQ9Y3B1 194 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 A0A0U1RQS6 177 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DPM1O60762 260 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 BEST1O76090 585 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 C22orf31O95567 290 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LGI1O95970 557 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HMGN1P05114 100 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ZNF140P52738 457 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 CD276Q5ZPR3 534 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ADNP2Q6IQ32 1131 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SPATA2LQ8IUW3 424 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 IQCF1Q8N6M8 205 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 BCL7CQ8WUZ0 217 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 TPT1P8Q9HAU6 139 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SEMA3GQ9NS98 782 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CRLS1Q9UJA2 301 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CDH10Q9Y6N8 788 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LOC102723532A0A0G2JNH3 316 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 UBE2QL1A1L167 161 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TSPAN12O95859 305 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HRGP04196 525 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HIST1H2AGP0C0S8 130 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 HIST1H2ADP20671 130 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CTAG1AP78358 180 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SSX1Q16384 188 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR4F3Q6IEY1 312 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 USP7Q93009 1102 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 H2AFJQ9BTM1 129 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CRTAC1Q9NQ79 661 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RAI2Q9Y5P3 530 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TREHO43280 583 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NCR1O76036 304 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NR2F6P10588 404 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GABRB1P18505 474 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 EVX1P49640 407 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NOXRED1Q6NXP6 359 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NLRC3Q7RTR2 1065 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CCDC36Q8IYA8 594 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LINC00518Q8N0U6 118 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 C11orf24Q96F05 449 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 NLNQ9BYT8 704 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MGAT4BQ9UQ53 548 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FXYD6-FXYD2A0A087WZ82 144 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LOC730098B7Z3J9 87 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SIGLEC6O43699 453 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GDF5P43026 501 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MAZP56270 477 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 B2MP61769 119 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RPS14P62263 151 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 EFEMP1Q12805 493 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FGL2Q14314 439 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SERPINB11Q96P15 392 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GPRC5BQ9NZH0 403 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MARCH2Q9P0N8 246 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR14I1A6ND48 311 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ANKDD1BA6NHY2 528 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GPR182O15218 404 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 PRR35P0CG20 571 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CHMP24386 653 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CASP9P55211 416 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GRIN2CQ14957 1233 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CCDC157Q569K6 752 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR8J1Q8NGP2 316 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SMAD5Q99717 465 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 SMOQ99835 787 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TRBC2A0A5B9 178 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 KHDRBS3O75525 346 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 SUOXP51687 545 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CYP27C1Q4G0S4 372 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MIB1Q86YT6 1006 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SLC30A8Q8IWU4 369 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CARNMT1Q8N4J0 409 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SCRN2Q96FV2 425 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MYO19Q96H55 970 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 P2RY13Q9BPV8 354 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 BPIFA1Q9NP55 256 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TXNL4BQ9NX01 149 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 SLC35F4A4IF30 521 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TRIM77I1YAP6 450 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LGALS8O00214 317 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GFRA2O00451 464 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FAAHO00519 579 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DARSP14868 501 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 ITPKAP23677 461 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DGKGP49619 791 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CPT1AP50416 773 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 WASH2PQ6VEQ5 465 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SIAH3Q8IW03 269 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TOMM5Q8N4H5 51 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TEX47Q8TBZ9 253 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms