RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CENPUQ71F23 418 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 STRA8Q7Z7C7 330 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 LIX1Q8N485 282 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 OR4K1Q8NGD4 311 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
LINC00642-202ENST00000442515 SGPP1Q9BX95 441 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 EPB41L4BQ9H329 900 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 ADAP2Q9NPF8 381 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 JKAMPQ9P055 326 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 ZFP69BQ9UJL9 534 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.84□□□□□ -0.35
LINC00642-202ENST00000442515 ARID1AO14497 2285 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 SH3D21A4FU49 640 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00642-202ENST00000442515 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00642-202ENST00000442515 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 AHRRA9YTQ3 701 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 ETS1P14921 441 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 NPPBP16860 134 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 CCND1P24385 295 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
LINC00642-202ENST00000442515 SCTRP47872 440 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
LINC00642-202ENST00000442515 OASLQ15646 514 aaKnown RBP12.83□□□□□ -0.36
LINC00642-202ENST00000442515 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 CILP2Q8IUL8 1156 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 CPNE9Q8IYJ1 553 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 KCNJ9Q92806 393 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 HSPBAP1Q96EW2 488 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 CCL19Q99731 98 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 KIFC1Q9BW19 673 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 ACKR4Q9NPB9 350 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 PRTFDC1Q9NRG1 225 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 SYBUQ9NX95 663 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 ADAMTS6Q9UKP5 1117 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.36
LINC00642-202ENST00000442515 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 NRDCO43847 1150 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 CNOT4O95628 575 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 SMIM10L1P0DMW3 83 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 CYLC1P35663 651 aaPredicted RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 TRPC1P48995 793 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 HNRNPFP52597 415 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 KCNJ2P63252 427 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 KRTAP1-1Q07627 177 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 SLC13A2Q13183 592 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 BMPR2Q13873 1038 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 ELAVL1Q15717 326 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 PHKG1Q16816 387 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 NSUN5P2Q63ZY6 315 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 OPN5Q6U736 354 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 LRRC25Q8N386 305 aaPredicted RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 TBC1D19Q8N5T2 526 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 ZNF321PQ8N8H1 164 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 TC2NQ8N9U0 490 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 TMEM52Q8NDY8 209 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 TMEM158Q8WZ71 300 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 SMIM10Q96HG1 83 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 GPR21Q99679 349 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 KLHL31Q9H511 634 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 SH2D2AQ9NP31 389 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 ZFP64Q9NPA5 681 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 INTS10Q9NVR2 710 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 PDE10AQ9Y233 779 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 EIF3LQ9Y262 564 aaKnown RBP12.82□□□□□ -0.36
LINC00642-202ENST00000442515 NPFFR2Q9Y5X5 522 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 CLCA3PQ9Y6N3 262 aa12.82□□□□□ -0.36
LINC00642-202ENST00000442515 URADA6NGE7 173 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CLDN4O14493 209 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 NID1P14543 1247 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CTSSP25774 331 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 MGAT1P26572 445 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 OPRM1P35372 400 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
LINC00642-202ENST00000442515 HSD17B7P56937 341 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CCZ1BP86790 482 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CRYZQ08257 329 aaKnown RBP12.81□□□□□ -0.36
LINC00642-202ENST00000442515 DUSP8Q13202 625 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CTBP1Q13363 440 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 PRAMEF20Q5VT98 475 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 KIAA0930Q6ICG6 404 aaPredicted RBP12.81□□□□□ -0.36
LINC00642-202ENST00000442515 ZNF549Q6P9A3 640 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 PODNL1Q6PEZ8 512 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 CLNKQ7Z7G1 428 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 TMEM132CQ8N3T6 1108 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 ANKRD53Q8N9V6 530 aa12.81□□□□□ -0.36
LINC00642-202ENST00000442515 PPP1R14CQ8TAE6 165 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms