RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TBC1D3GQ6DHY5 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3CQ6IPX1 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LRRC8EQ6NSJ5 796 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPUSD3Q6P087 351 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLC3Q6P597 504 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 KDELC2Q7Z4H8 507 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 GALNT7Q86SF2 657 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SDCCAG8Q86SQ7 713 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CEP97Q8IW35 865 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 DENND6AQ8IWF6 608 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 DDIASQ8IXT1 998 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3Q8IZP1 549 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CENPLQ8N0S6 344 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LGI2Q8N0V4 545 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 BBS5Q8N3I7 341 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CPSF7Q8N684 471 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TEX26Q8N6G2 289 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF781Q8N8C0 355 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAB21L3Q8N8X9 362 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATAD1Q8NBU5 361 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PPFIBP2Q8ND30 876 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACVR1CQ8NER5 493 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARRDC2Q8TBH0 407 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 HEXDCQ8WVB3 486 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 KCTD4Q8WVF5 259 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PEX13Q92968 403 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 STMN2Q93045 179 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMG2Q969U7 264 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TADA1Q96BN2 335 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NXNL1Q96CM4 212 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CMTM5Q96DZ9 223 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC126Q96EE4 140 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CNDP1Q96KN2 507 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 B3GALT6Q96L58 329 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CEP295NLQ96MC4 621 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF599Q96NL3 588 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPRD1AQ96P16 312 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPR78Q96P69 363 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLHL5Q96PQ7 755 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZPBPQ9BS86 351 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 THTPAQ9BU02 230 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 POLR1EQ9GZS1 481 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RSPH9Q9H1X1 276 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 EML4Q9HC35 981 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TCF7L2Q9NQB0 619 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 BATF3Q9NR55 127 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MARCH5Q9NX47 278 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 HCN3Q9P1Z3 774 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC2A6Q9UGQ3 507 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 FBXO5Q9UKT4 447 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ANGPTL2Q9UKU9 493 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLA2G4CQ9UP65 541 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAGED1Q9Y5V3 778 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 COPG1Q9Y678 874 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TSC2P49815 1807 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GOLGA8QA0A0J9YX86 632 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LOC100653049A0A140TA62 436 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 RGSL1A5PLK6 1076 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GOLGA8OA6NCC3 632 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRPC5OSA6NMA1 111 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 C17orf100A8MU93 164 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MEI4A8MW99 385 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF814B7Z6K7 855 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 TEX22C9J3V5 150 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GOLGA8NF8WBI6 632 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 VILLO15195 856 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HDAC3O15379 428 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NVLO15381 856 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GRID2O43424 1007 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KDELR3O43731 214 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRAMEF11O60813 436 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBX10O75333 385 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLDN11O75508 207 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ERAL1O75616 437 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KRT34O76011 436 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KRT36O76013 467 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LUC7L3O95232 432 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCNDBP1O95273 360 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLKB1P03952 638 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 FGF1P05230 155 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CHRNGP07510 517 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SERPINF2P08697 491 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HOXB8P17481 243 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HLA-DPA1P20036 260 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATP6V1C1P21283 382 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIK3R1P27986 724 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 AVPR2P30518 371 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR1E1P30953 314 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR1D2P34982 312 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CPOXP36551 454 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMB10P40306 273 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PCP4P48539 62 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NUMBP49757 651 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 RGS19P49795 217 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms