RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ACOT8O14734 319 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AKAP10O43572 662 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TLX3O43711 291 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANP32DO95626 131 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 COX7A2P14406 83 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FOLR1P15328 257 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NELFEP18615 380 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TACR1P25103 407 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RBMS1P29558 406 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RPL3P39023 403 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PTDSS1P48651 473 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 YBX1P67809 324 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MRPS22P82650 360 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PLIN5Q00G26 463 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MS4A2Q01362 244 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZIC1Q15915 447 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MUM1Q2TAK8 710 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ADNP2Q6IQ32 1131 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DNAJC14Q6Y2X3 702 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 GPR180Q86V85 440 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DHFR2Q86XF0 187 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TMEM132CQ8N3T6 1108 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR8J3Q8NGG0 315 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CHTF18Q8WVB6 975 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC41A2Q96JW4 573 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC46A1Q96NT5 459 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CGREF1Q99674 301 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SH3GL1Q99961 368 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CENPKQ9BS16 269 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PCDHAC1Q9H158 963 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPNS1Q9H2V7 528 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ALG2Q9H553 416 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NT5DC2Q9H857 520 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CUEDC1Q9NWM3 386 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC39A1Q9NY26 324 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AHSPQ9NZD4 102 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PPT2Q9UMR5 302 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FREM2Q5SZK8 3169 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PKD1L2Q7Z442 2459 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 A0A0J9YY10 115 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 CDRT15L2A8MXV6 281 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 B4E171 279 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TAF4O00268 1085 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TOX3O15405 576 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ERN1O75460 977 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ETHE1O95571 254 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TGFB1P01137 390 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 PTX3P26022 381 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 CMPK1P30085 196 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GCKP35557 465 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GRK3P35626 688 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TSPAN7P41732 249 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 KIR3DL1P43629 444 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ARL4DP49703 201 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GSK3BP49841 420 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ABATP80404 500 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 LIPEQ05469 1076 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 SRSF11Q05519 484 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ZNF763Q0D2J5 394 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 MAP7Q14244 749 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 KIR2DS3Q14952 304 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GPR19Q15760 415 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 HKDC1Q2TB90 917 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 NANOGP8Q6NSW7 305 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 IFNEQ86WN2 208 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ABHD11Q8NFV4 315 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GFM2Q969S9 779 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TRAPPC9Q96Q05 1148 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 PRPF18Q99633 342 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 NANOGQ9H9S0 305 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 B3GALT1Q9Y5Z6 326 aa13.83□□□□□ -0.2
TNFRSF1A-204ENST00000440083 A0A096LPI6 279 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 SCAMP2O15127 329 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 NVLO15381 856 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 PRICKLE3O43900 615 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 GMNNO75496 209 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ZBTB11O95625 1053 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 C8BP07358 591 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 SLC5A2P31639 672 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 C21orf58P58505 322 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 CYP4F2P78329 520 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 HSD11B2P80365 405 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 MC2RQ01718 297 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 SLC5A12Q1EHB4 618 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 DEFB110Q30KQ9 67 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 RABL3Q5HYI8 236 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 IGF2-ASQ6U949 168 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 COMMD6Q7Z4G1 85 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 ZNF740Q8NDX6 193 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TNIP2Q8NFZ5 429 aa13.82□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TTLQ8NG68 377 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms