RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 RPTNQ6XPR3 784 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 SRFBP1Q8NEF9 429 aaKnown RBP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 ITLN2Q8WWU7 325 aaPredicted RBP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 UBE2E3Q969T4 207 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 TMEM125Q96AQ2 219 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CCDC120Q96HB5 630 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 MAGED4Q96JG8 741 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 CSF3RQ99062 836 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 MS4A8Q9BY19 250 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 LYRM4Q9HD34 91 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 PRDM7Q9NQW5 492 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF223Q9UK11 482 aaPredicted RBP15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 ENTPD4Q9Y227 616 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
SNRPD3-204ENST00000439775 SUPT3HB4E1H0 165 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 K7EPI3 171 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 CCL21O00585 134 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 SUPT3HO75486 399 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 WISP2O76076 250 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 SCELO95171 688 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 MSH2P43246 934 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 GPR143P51810 404 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 CKAP4Q07065 602 aaKnown RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 ART3Q13508 389 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 ELAVL1Q15717 326 aaKnown RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 MAPKAPK3Q16644 382 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 TMEM35AQ53FP2 167 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 Q6ZPB1 254 aaPredicted RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 TICAM1Q8IUC6 712 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 LAS2Q8IYD9 372 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 POGLUT1Q8NBL1 392 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 RHEBL1Q8TAI7 183 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF473Q8WTR7 871 aaKnown RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 NCLNQ969V3 563 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 F2RL3Q96RI0 385 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 TBCDQ9BTW9 1192 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 PNO1Q9NRX1 252 aaKnown RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 OPTCQ9UBM4 332 aa15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 KLF13Q9Y2Y9 288 aaPredicted RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 KLF2Q9Y5W3 355 aaPredicted RBP15.18■□□□□ 0.02
SNRPD3-204ENST00000439775 A0A087X1B8 175 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 SYCE1LA8MT33 242 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 NPIPA5E9PKD4 350 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 UBXN8O00124 270 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 CTNSO60931 367 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ITGA10O75578 1167 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF24P17028 368 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 PPP2R1BP30154 601 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 C8orf74Q6P047 294 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 MED27Q6P2C8 311 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF793Q6ZN11 406 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 UBE3DQ7Z6J8 389 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 SPPL2CQ8IUH8 684 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 CENPLQ8N0S6 344 aaPredicted RBP15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 GHDCQ8N2G8 530 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 TMEM132CQ8N3T6 1108 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ZNF808Q8N4W9 903 aaPredicted RBP15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 CCDC77Q9BR77 488 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 TSPAN10Q9H1Z9 355 aaPredicted RBP15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ZDHHC18Q9NUE0 388 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 KCMF1Q9P0J7 381 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 NPIPA1Q9UND3 350 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ACOT9Q9Y305 439 aa15.17■□□□□ 0.02
SNRPD3-204ENST00000439775 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 PRSS44E7EML9 344 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 HNRNPRO43390 633 aaKnown RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 ASNA1O43681 348 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 MTHFD2P13995 350 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 HIST1H1TP22492 207 aaPredicted RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 ATP5A1P25705 553 aaKnown RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 NAA30Q147X3 362 aaPredicted RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 C3AR1Q16581 482 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 FAM83EQ2M2I3 478 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 GRHL2Q6ISB3 625 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 CHSY3Q70JA7 882 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 CLNKQ7Z7G1 428 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 CYP4Z2PQ8N1L4 340 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 CPSF7Q8N684 471 aaKnown RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 ACOT4Q8N9L9 421 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 OR7G3Q8NG95 312 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 DAZLQ92904 295 aaKnown RBP15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 NXNL1Q96CM4 212 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 VTI1BQ9UEU0 232 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 ADGRE2Q9UHX3 823 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 SH3BGRL2Q9UJC5 107 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 TINAGQ9UJW2 476 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 FBXW2Q9UKT8 454 aa15.16■□□□□ 0.02
SNRPD3-204ENST00000439775 HMX2A2RU54 273 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 ZFAND5O76080 213 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 C2P06681 752 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 EPB42P16452 691 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 AGAP20933 346 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 SSR4P51571 173 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 SERTAD2Q14140 314 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 SETDB1Q15047 1291 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 RNFT1Q5M7Z0 435 aa15.15■□□□□ 0.02
SNRPD3-204ENST00000439775 MROH9Q5TGP6 573 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms