RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PREPP48147 710 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 RAB14P61106 215 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 HSPB3Q12988 150 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MAB21L1Q13394 359 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 LARS2Q15031 903 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 EIF4HQ15056 248 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 FRMPD2BQ6IN97 320 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 NCEH1Q6PIU2 408 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 THOC6Q86W42 341 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 SETD6Q8TBK2 473 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MAPKAP1Q9BPZ7 522 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 CLSTN3Q9BQT9 956 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 HDHD5Q9BXW7 423 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 SPRTNQ9H040 489 aaPredicted RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 MED28Q9H204 178 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 GPR52Q9Y2T5 361 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 ALG5Q9Y673 324 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 CFAP20Q9Y6A4 193 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 B4GALT3O60512 393 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 UGT2B17O75795 530 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 NCR1O76036 304 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 CELF2O95319 508 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 IGSF6O95976 241 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 DDX5P17844 614 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 CBLP22681 906 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ASMTP46597 345 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 BDKRB1P46663 353 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 AVPR1BP47901 424 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 RFX2P48378 723 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FAPQ12884 760 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 EIF4EBP2Q13542 120 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 COL9A2Q14055 689 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 VEZF1Q14119 521 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GPR19Q15760 415 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 B3GLCTQ6Y288 498 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ADCK2Q7Z695 626 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 LHFPL3Q86UP9 236 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 VRK3Q8IV63 474 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FAM109AQ8N4B1 249 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 XAGE5Q8WWM1 108 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 EID2BQ96D98 161 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MAP6Q96JE9 813 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 PPIL3Q9H2H8 161 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 PTGFRNQ9P2B2 879 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 HCSTQ9UBK5 93 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SEC14L3Q9UDX4 400 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 LCTP09848 1927 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 B4DXG7 233 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 INMT-MINDY4F8WBC2 141 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SCAMP2O15127 329 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 COCHO43405 550 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MYCP01106 439 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 CATP04040 527 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 KLK1P06870 262 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 POLR2AP24928 1970 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 SCN4AP35499 1836 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GATMP50440 423 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GZMMP51124 257 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 HBA1P69905 142 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SSX1Q16384 188 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ADGRF1Q5T601 910 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GPRC6AQ5T6X5 926 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 CEACAM20Q6UY09 585 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FAM124AQ86V42 546 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GPR26Q8NDV2 337 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 OR52E4Q8NGH9 312 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FBLIM1Q8WUP2 373 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SLC9A6Q92581 669 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SCAMP4Q969E2 229 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 OPALINQ96PE5 141 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ZSCAN5AQ9BUG6 496 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GALNT9Q9HCQ5 603 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 NPAP1Q9NZP6 1156 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ING4Q9UNL4 249 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 KCNE2Q9Y6J6 123 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MYLKQ15746 1914 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SBF1O95248 1867 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 A0A1W2PRB8 838 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SCO2O43819 266 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SLC28A2O43868 658 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 CSO75390 466 aaKnown RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 TOXO94900 526 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 KLKB1P03952 638 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SDHBP21912 280 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 AOAHP28039 575 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 PTGS2P35354 604 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MAGEA11P43364 429 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 TAS2R50P59544 299 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 PSPHP78330 225 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 CNTN1Q12860 1018 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FLYWCH1Q4VC44 716 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 HIST2H2AA3Q6FI13 130 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SIGIRRQ6IA17 410 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 CNIH2Q6PI25 160 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms