RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 HPNP05981 417 aa10□□□□□ -0.81
RTN4-211ENST00000438462 PKMP14618 531 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 TCF4P15884 667 aa10□□□□□ -0.81
RTN4-211ENST00000438462 ITGALP20701 1170 aa10□□□□□ -0.81
RTN4-211ENST00000438462 ACRV1P26436 265 aa10□□□□□ -0.81
RTN4-211ENST00000438462 IL2RGP31785 369 aa10□□□□□ -0.81
RTN4-211ENST00000438462 CDKN1CP49918 316 aaPredicted RBP10□□□□□ -0.81
RTN4-211ENST00000438462 CDK9P50750 372 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 IL13RA1P78552 427 aa10□□□□□ -0.81
RTN4-211ENST00000438462 IFI35P80217 286 aaPredicted RBP10□□□□□ -0.81
RTN4-211ENST00000438462 POU4F1Q01851 419 aa10□□□□□ -0.81
RTN4-211ENST00000438462 SRYQ05066 204 aa10□□□□□ -0.81
RTN4-211ENST00000438462 MMRN1Q13201 1228 aa10□□□□□ -0.81
RTN4-211ENST00000438462 STIM1Q13586 685 aa10□□□□□ -0.81
RTN4-211ENST00000438462 FAM189A2Q15884 450 aa10□□□□□ -0.81
RTN4-211ENST00000438462 CLEC16AQ2KHT3 1053 aa10□□□□□ -0.81
RTN4-211ENST00000438462 EIPR1Q53HC9 387 aa10□□□□□ -0.81
RTN4-211ENST00000438462 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
RTN4-211ENST00000438462 NCMAPQ5T1S8 102 aa10□□□□□ -0.81
RTN4-211ENST00000438462 HECTD2Q5U5R9 776 aa10□□□□□ -0.81
RTN4-211ENST00000438462 AGAP6Q5VW22 663 aa10□□□□□ -0.81
RTN4-211ENST00000438462 SLC22A10Q63ZE4 541 aa10□□□□□ -0.81
RTN4-211ENST00000438462 C11orf71Q6IPW1 123 aa10□□□□□ -0.81
RTN4-211ENST00000438462 TMEM214Q6NUQ4 689 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 OPN5Q6U736 354 aa10□□□□□ -0.81
RTN4-211ENST00000438462 ATG4DQ86TL0 474 aaPredicted RBP10□□□□□ -0.81
RTN4-211ENST00000438462 SCUBE1Q8IWY4 988 aa10□□□□□ -0.81
RTN4-211ENST00000438462 GALNT12Q8IXK2 581 aa10□□□□□ -0.81
RTN4-211ENST00000438462 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
RTN4-211ENST00000438462 ZNF610Q8N9Z0 462 aa10□□□□□ -0.81
RTN4-211ENST00000438462 CCNYQ8ND76 341 aa10□□□□□ -0.81
RTN4-211ENST00000438462 DHTKD1Q96HY7 919 aaPredicted RBP10□□□□□ -0.81
RTN4-211ENST00000438462 ZNF845Q96IR2 970 aaPredicted RBP10□□□□□ -0.81
RTN4-211ENST00000438462 ZNF597Q96LX8 424 aa10□□□□□ -0.81
RTN4-211ENST00000438462 LYSTQ99698 3801 aa10□□□□□ -0.81
RTN4-211ENST00000438462 TACO1Q9BSH4 297 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 SUCNR1Q9BXA5 334 aa10□□□□□ -0.81
RTN4-211ENST00000438462 C12orf49Q9H741 205 aa10□□□□□ -0.81
RTN4-211ENST00000438462 NECTIN3Q9NQS3 549 aa10□□□□□ -0.81
RTN4-211ENST00000438462 EIF2B3Q9NR50 452 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 CISD1Q9NZ45 108 aaKnown RBP10□□□□□ -0.81
RTN4-211ENST00000438462 PRSS21Q9Y6M0 314 aa10□□□□□ -0.81
RTN4-211ENST00000438462 NINQ8N4C6 2090 aa10□□□□□ -0.81
RTN4-211ENST00000438462 EXPH5Q8NEV8 1989 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 GFYI3L273 518 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 STK10O94804 968 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 TGM6O95932 706 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CGAP01215 116 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CRHP06850 196 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 FESP07332 822 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CD48P09326 243 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 ATP1A3P13637 1013 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 PCMT1P22061 227 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CMA1P23946 247 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 PDLIM4P50479 330 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 NAGLUP54802 743 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 OLR1P78380 273 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 PPIDQ08752 370 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 ZNF844Q08AG5 666 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 PAFAH1B3Q15102 231 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 TERF2Q15554 542 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CCSMST1Q4G0I0 132 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 ZNF425Q6IV72 752 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 SNX20Q7Z614 316 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 VRK3Q8IV63 474 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 SLC22A15Q8IZD6 547 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 PPHLN1Q8NEY8 458 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 HMGCLL1Q8TB92 370 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 SLC6A7Q99884 636 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 ACTR6Q9GZN1 396 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 CDC42EP4Q9H3Q1 356 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 GAR1Q9NY12 217 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 IMPACTQ9P2X3 320 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 DMGDHQ9UI17 866 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 PPIEQ9UNP9 301 aaKnown RBP9.99□□□□□ -0.81
RTN4-211ENST00000438462 PPIAL4AQ9Y536 164 aa9.99□□□□□ -0.81
RTN4-211ENST00000438462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■□□□□ 9.1
RTN4-211ENST00000438462 LOC285095A0A1B0GVY8 99 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 NDUFS8O00217 210 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 PDE5AO76074 875 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 GFPT2O94808 682 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 C1QAP02745 245 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 FTH1P02794 183 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 PRSS56P0CW18 603 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 CHMP24386 653 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 GMPRP36959 345 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 KIR2DL2P43627 348 aaPredicted RBP9.98□□□□□ -0.81
RTN4-211ENST00000438462 BDKRB1P46663 353 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 DVL1P1P54792 670 aaPredicted RBP9.98□□□□□ -0.81
RTN4-211ENST00000438462 C21orf58P58505 322 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 RABEP1Q15276 862 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 TOMM20Q15388 145 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 CYP1B1Q16678 543 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 RUSC1-AS1Q66K80 236 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 DPY19L2P1Q6NXN4 242 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 SCIMPQ6UWF3 145 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 NXPE4Q6UWF7 544 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 VN1R4Q7Z5H5 301 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 ADCK2Q7Z695 626 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms