RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FIGLAQ6QHK4 219 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 SPESP1Q6UW49 350 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 ENPP6Q6UWR7 440 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 FAM47BQ8NA70 645 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 TNIP2Q8NFZ5 429 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 OR2L5Q8NG80 312 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 FAM162AQ96A26 154 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 EME1Q96AY2 570 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 RNF145Q96MT1 663 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 TRIM4Q9C037 500 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 ADAM29Q9UKF5 820 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.07■□□□□ 0.8
PTPRF-207ENST00000436724 ANGPTL8Q6UXH0 198 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 SERPINA11Q86U17 422 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 IQCHQ86VS3 1027 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 ACOT4Q8N9L9 421 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 CIB1Q99828 191 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 EPB41L1Q9H4G0 881 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 ZNF696Q9H7X3 374 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 GPATCH2Q9NW75 528 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 SNX11Q9Y5W9 270 aa20.07■□□□□ 0.8
PTPRF-207ENST00000436724 GLOD5A6NK44 160 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 C2orf74A8MZ97 194 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 HNRNPRO43390 633 aaKnown RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 TNFSF14O43557 240 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 SH3BP5O60239 455 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 CREG1O75629 220 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 FAM58BPP0C7Q3 252 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 HIST1H1TP22492 207 aaPredicted RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 CERS1P27544 350 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 GSTM2P28161 218 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 RPS15AP62244 130 aaKnown RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 SLAMF1Q13291 335 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 ELOCQ15369 112 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 ADRM1Q16186 407 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 NRF1Q16656 503 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 IRAK1BP1Q5VVH5 260 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 PTOV1Q86YD1 416 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 GOT1L1Q8NHS2 421 aaPredicted RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 EXOSC8Q96B26 276 aaKnown RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 ZNF597Q96LX8 424 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 KCNC2Q96PR1 638 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 OR2A5Q96R48 311 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 SLC29A1Q99808 456 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 AGPAT4Q9NRZ5 378 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 ZNF282Q9UDV7 671 aaPredicted RBP20.06■□□□□ 0.8
PTPRF-207ENST00000436724 DMDP11532 3685 aa20.06■□□□□ 0.8
PTPRF-207ENST00000436724 SMIM31A0A1B0GVY4 71 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 H0YJX3 145 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 UMPSP11172 480 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 CKMT2P17540 419 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 NKG7Q16617 165 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 NDUFAF5Q5TEU4 345 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 FRMPD2BQ6IN97 320 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 TRIM40Q6P9F5 258 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 GALNT10Q86SR1 603 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.05■□□□□ 0.84e-6■■■■■ 36.3
PTPRF-207ENST00000436724 ZZZ3Q8IYH5 903 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 OR10Q1Q8NGQ4 319 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 SLC35A5Q9BS91 424 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 TAS2R9Q9NYW1 312 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 UTS2RQ9UKP6 389 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 DOLKQ9UPQ8 538 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 PCDHGA2Q9Y5H1 932 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 LOC105369274A0A096LPK9 316 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 LOC102723532A0A0G2JNH3 316 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 MYOCOSA0A1B0GUC4 107 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 P2RX6O15547 441 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 SCELO95171 688 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 ATP5A1P25705 553 aaKnown RBP20.05■□□□□ 0.8
PTPRF-207ENST00000436724 RPL5P46777 297 aaKnown RBP20.05■□□□□ 0.8
PTPRF-207ENST00000436724 CLCN2P51788 898 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 NXPH1P58417 271 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 RGNQ15493 299 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 COX20Q5RI15 118 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 ASPGQ86U10 573 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 OR4N4Q8N0Y3 316 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 MAL2Q969L2 176 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 CHID1Q9BWS9 393 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 NDUFA13Q9P0J0 144 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 RAPGEFL1Q9UHV5 662 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 ATG4BQ9Y4P1 393 aa20.05■□□□□ 0.8
PTPRF-207ENST00000436724 WDFY4Q6ZS81 3184 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 TNFAIP8O95379 198 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 CLPTM1O96005 669 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 MVDP53602 400 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 LRRC74AQ0VAA2 488 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 SLC9A5Q14940 896 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 SLC36A4Q6YBV0 504 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 METTL25Q8N6Q8 603 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 PAPD5Q8NDF8 572 aaKnown RBP20.04■□□□□ 0.8
PTPRF-207ENST00000436724 PILRAQ9UKJ1 303 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 FBXW2Q9UKT8 454 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 ENTPD2Q9Y5L3 495 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 FAM221BA6H8Z2 402 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 OR5K3A6NET4 321 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 PRKD3O94806 890 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 SERPINA1P01009 418 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 ETS2P15036 469 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms