RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RENBPP51606 427 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ITGA1P56199 1179 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 BACE1P56817 501 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 LGALSLQ3ZCW2 172 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GPR139Q6DWJ6 353 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MBOAT1Q6ZNC8 495 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OR11H7Q8NGC8 314 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 C9orf43Q8TAL5 461 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 NELL1Q92832 810 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 IMP4Q96G21 291 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MYO19Q96H55 970 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 WWOXQ9NZC7 414 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SOWAHBA6NEL2 793 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CHURC1-FNTBB4DL54 471 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HBP1O60381 514 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 KCNK5O95279 499 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 TPOP07202 933 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HIST1H2AGP0C0S8 130 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HIST1H2ADP20671 130 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MAPK9P45984 424 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 KIAA0907Q7Z7F0 614 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OOSP2Q86WS3 158 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 STPG2Q8N412 459 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 NKAPQ8N5F7 415 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 COQ8AQ8NI60 647 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HIST1H2AHQ96KK5 128 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 C1orf74Q96LT6 269 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 TEPSINQ96N21 525 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HIST1H2AJQ99878 128 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 H2AFJQ9BTM1 129 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GSX2Q9BZM3 304 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 KCNH6Q9H252 994 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ZFP64Q9NPA5 681 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ENOPH1Q9UHY7 261 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MROH6A6NGR9 719 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GLAP06280 429 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF286BP0CG31 522 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CLDN8P56748 225 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 BCL2L1Q07817 233 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 DDX39BQ13838 428 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 DSG2Q14126 1118 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OR2G6Q5TZ20 316 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RTL4Q6ZR62 310 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 DENND6BQ8NEG7 585 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OR7D4Q8NG98 312 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SLC25A46Q96AG3 418 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 AP2M1Q96CW1 435 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PCED1BQ96HM7 432 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PARK7Q99497 189 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OSMRQ99650 979 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF416Q9BWM5 594 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ABCG5Q9H222 651 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CRTAC1Q9NQ79 661 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SDHAF2Q9NX18 166 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 H2AFY2Q9P0M6 372 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF175Q9Y473 711 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 KPNA5O15131 536 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 C22orf31O95567 290 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 OTCP00480 354 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SCG5P05408 212 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 PKMP14618 531 aaKnown RBP7.15□□□□□ -1.26
CPSF6-202ENST00000435070 HTR7P34969 479 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 EIF4HQ15056 248 aaKnown RBP7.15□□□□□ -1.26
CPSF6-202ENST00000435070 PSAPL1Q6NUJ1 521 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 LRRC52Q8N7C0 313 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 OR8K5Q8NH50 307 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 GIMAP5Q96F15 307 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 WDFY2Q96P53 400 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 NFKBIZQ9BYH8 718 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 PPT2Q9UMR5 302 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 ANK1P16157 1881 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 TRBV5-3A0A0A0MS03 114 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 STAU1O95793 577 aaKnown RBP7.15□□□□□ -1.26
CPSF6-202ENST00000435070 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.15□□□□□ -1.262e-6■■□□□ 14.4
CPSF6-202ENST00000435070 KCNC3Q14003 757 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 ATAT1Q5SQI0 421 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 FTMTQ8N4E7 242 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 GPR150Q8NGU9 434 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 NELL2Q99435 816 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 MARVELD1Q9BSK0 173 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SMIM28A0A1B0GU29 152 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 M0R233 179 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SLC43A1O75387 559 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 ANXA3P12429 323 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 CSKP41240 450 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 PGFP49763 221 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 KIAA1024LP59773 190 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 LILRA4P59901 499 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 INSL4Q14641 139 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 MTFR2Q6P444 385 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 WDR53Q7Z5U6 358 aaPredicted RBP7.15□□□□□ -1.26
CPSF6-202ENST00000435070 AQP11Q8NBQ7 271 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SELENOMQ8WWX9 145 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SMG7Q92540 1137 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms