RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 COL9A2Q14055 689 aaPredicted RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 NDUFAF5Q5TEU4 345 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 HES3Q5TGS1 186 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 PRAMEF17Q5VTA0 474 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 CCDC121Q6ZUS5 278 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 TTLL10Q6ZVT0 673 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 R3HCC1LQ7Z5L2 792 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 POU5F2Q8N7G0 328 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 MTERF3Q96E29 417 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 LIN37Q96GY3 246 aaPredicted RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 PRPF18Q99633 342 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 MAPKAP1Q9BPZ7 522 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 FAIM2Q9BWQ8 316 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 SLC52A3Q9NQ40 469 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 MS4A12Q9NXJ0 267 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 ATP6V1HQ9UI12 483 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 CLCA2Q9UQC9 943 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 A0A1W2PR48 441 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DYTNA2CJ06 578 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 GABRR3A8MPY1 467 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 POLR1CO15160 346 aaPredicted RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 FURINP09958 794 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 CCL4P13236 92 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DDCP20711 480 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 ALAS2P22557 587 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 CLDN6P56747 220 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 MC1RQ01726 317 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 SRSF11Q05519 484 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 UGT8Q16880 541 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DPY19L1Q2PZI1 675 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 FAM174BQ3ZCQ3 159 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DTWD1Q8N5C7 304 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 SPDL1Q96EA4 605 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DNAJB6O75190 326 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 ESRRAP11474 423 aaPredicted RBP25.03■■□□□ 1.6
TMEM248-205ENST00000433271 COX7A2P14406 83 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 CALB2P22676 271 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 STX5Q13190 355 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 PDE7AQ13946 482 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 VPS26BQ4G0F5 336 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 PWWP2BQ6NUJ5 590 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 CAMKMTQ7Z624 323 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 TMEM126BQ8IUX1 230 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 OR7A2PQ8NGA2 310 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 OR5T3Q8NGG3 340 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 APMAPQ9HDC9 416 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 CDC14AQ9UNH5 594 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 LOXL2Q9Y4K0 774 aa25.03■■□□□ 1.6
TMEM248-205ENST00000433271 DMXL1Q9Y485 3027 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 A0A1W2PP18 115 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 CCDC154A6NI56 674 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 DSCR3O14972 297 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 RDH16O75452 317 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 CAPN3P20807 821 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 OLR1P78380 273 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.02■■□□□ 1.6
TMEM248-205ENST00000433271 SPANXN4Q5MJ08 99 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 CPTPQ5TA50 214 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 RHBDD2Q6NTF9 364 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 RAB11FIP2Q7L804 512 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 MMP21Q8N119 569 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 EFCAB3Q8N7B9 438 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 COQ8BQ96D53 544 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 MMABQ96EY8 250 aaPredicted RBP25.02■■□□□ 1.6
TMEM248-205ENST00000433271 MIEF1Q9NQG6 463 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 DHCR7Q9UBM7 475 aaKnown RBP25.02■■□□□ 1.6
TMEM248-205ENST00000433271 PCDHB3Q9Y5E6 796 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 SPACA6W5XKT8 324 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 CEP250Q9BV73 2442 aa25.02■■□□□ 1.6
TMEM248-205ENST00000433271 A0A1B0GX78 115 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 SCRG1O75711 98 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 PGRP06401 933 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 PIM1P11309 404 aaPredicted RBP25.01■■□□□ 1.59
TMEM248-205ENST00000433271 S100A3P33764 101 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 BUD31P41223 144 aaPredicted RBP25.01■■□□□ 1.59
TMEM248-205ENST00000433271 MNAT1P51948 309 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 DGKQP52824 942 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 PGS1Q32NB8 556 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 PRMT9Q6P2P2 845 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 CA13Q8N1Q1 262 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 OR8J2Q8NGG1 315 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 VPS33AQ96AX1 596 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 ZNF764Q96H86 408 aaPredicted RBP25.01■■□□□ 1.59
TMEM248-205ENST00000433271 SLC7A5P2Q9GIP4 190 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 ACTR5Q9H9F9 607 aaPredicted RBP25.01■■□□□ 1.59
TMEM248-205ENST00000433271 TXLNGQ9NUQ3 528 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 EHD3Q9NZN3 535 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 NDOR1Q9UHB4 597 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 PCDHA9Q9Y5H5 950 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 C1orf226A1L170 272 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 CFLARO15519 480 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 CHST10O43529 356 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 TBX19O60806 448 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 TIAF1O95411 115 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 AIFM1O95831 613 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 HBQ1P09105 142 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 CPN2P22792 545 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 TLX1P31314 330 aaPredicted RBP25.01■■□□□ 1.59
TMEM248-205ENST00000433271 KIR3DL1P43629 444 aa25.01■■□□□ 1.59
TMEM248-205ENST00000433271 NOVA1P51513 510 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms