RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SRRM1Q8IYB3 904 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 LAS2Q8IYD9 372 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCNYL1Q8N7R7 359 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 GOLGA6L1Q8N7Z2 621 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 FAM47BQ8NA70 645 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TEX19Q8NA77 164 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM52Q8NDY8 209 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR2L5Q8NG80 312 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR4F6Q8NGB9 312 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 HUS1BQ8NHY5 278 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF483Q8TF39 744 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SREK1Q8WXA9 508 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TSLPQ969D9 159 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 UCN3Q969E3 161 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CAVIN3Q969G5 261 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TBC1D20Q96BZ9 403 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CMTM7Q96FZ5 175 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 VPS50Q96JG6 964 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 QRFPRQ96P65 431 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 MAPKAP1Q9BPZ7 522 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 MS4A8Q9BY19 250 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SHCBP1LQ9BZQ2 653 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PITHD1Q9GZP4 211 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF552Q9H707 407 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 NECTIN3Q9NQS3 549 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 FARSBQ9NSD9 589 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 C14orf105Q9NVL8 296 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 GPR83Q9NYM4 423 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLA2G3Q9NZ20 509 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PTGFRNQ9P2B2 879 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PCTPQ9UKL6 214 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 EMCNQ9ULC0 261 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 GRID1Q9ULK0 1009 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMCO1Q9UM00 188 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 G3BP2Q9UN86 482 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 FRYQ5TBA9 3013 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SEC16AO15027 2179 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 IGHV1-45A0A0A0MS14 117 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCDC189A1A4V9 331 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 A6NHS1 94 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 H0YIV9 168 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SUV39H1O43463 412 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 LDB3O75112 727 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CDH16O75309 829 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 GLRA3O75311 464 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TNFRSF21O75509 655 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CEACAM4O75871 244 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ETHE1O95571 254 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 HPP00738 406 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PDYNP01213 254 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 IFNA16P05015 189 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RPS17P08708 135 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 MYL2P10916 166 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RNH1P13489 461 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CPA3P15088 417 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TNNI3P19429 210 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 IL10P22301 178 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CPN2P22792 545 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 JAK1P23458 1154 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ATP5F1P24539 256 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ATP5A1P25705 553 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PTX3P26022 381 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SERPINB3P29508 390 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CRHR1P34998 444 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SSR2P43308 183 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 HNRNPFP52597 415 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 MTTPP55157 894 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 MLLT10P55197 1068 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RAB38P57729 211 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 HERVK_113P63132 956 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SKP1P63208 163 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PHEXP78562 749 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RHAGQ02094 409 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 BTKQ06187 659 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PCDH1Q08174 1060 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TGM3Q08188 693 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 KLRB1Q12918 225 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLAMF1Q13291 335 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ABRAXAS2Q15018 415 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PCOLCEQ15113 449 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 BTBD16Q32M84 506 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ADPRMQ3LIE5 342 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCDC153Q494R4 210 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLEKHN1Q494U1 663 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TCHHL1Q5QJ38 904 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CEP85LQ5SZL2 805 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 B3GNTL1Q67FW5 361 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 FCRLBQ6BAA4 426 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 NIPAL1Q6NVV3 410 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM205Q6UW68 189 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SCIMPQ6UWF3 145 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TDRPQ86YL5 185 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR4N5Q8IXE1 308 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 KBTBD2Q8IY47 623 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SIRT6Q8N6T7 355 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CDYL2Q8N8U2 506 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms