RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 DPEP2Q9H4A9 486 aa2.57□□□□□ -2
CLK1-204ENST00000432425 C10orf88Q9H8K7 445 aa2.57□□□□□ -2
CLK1-204ENST00000432425 RBM28Q9NW13 759 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 UTP6Q9NYH9 597 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 ZNF581Q9P0T4 197 aa2.57□□□□□ -2
CLK1-204ENST00000432425 SATB2Q9UPW6 733 aa2.57□□□□□ -2
CLK1-204ENST00000432425 LIPGQ9Y5X9 500 aa2.57□□□□□ -2
CLK1-204ENST00000432425 A0A0B4J203 849 aa2.57□□□□□ -2
CLK1-204ENST00000432425 NPIPA3F8WFD2 350 aa2.57□□□□□ -2
CLK1-204ENST00000432425 PENKP01210 267 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 HOXD10P28358 340 aa2.57□□□□□ -2
CLK1-204ENST00000432425 STIP1P31948 543 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 OR3A3P47888 321 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CDX1P47902 265 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 PRELPP51888 382 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CRYBA2P53672 197 aa2.57□□□□□ -2
CLK1-204ENST00000432425 POLR2FP61218 127 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 HYAL4Q2M3T9 481 aa2.57□□□□□ -2
CLK1-204ENST00000432425 ZNF674Q2M3X9 581 aa2.57□□□□□ -2
CLK1-204ENST00000432425 WSCD2Q2TBF2 565 aa2.57□□□□□ -2
CLK1-204ENST00000432425 TTC31Q49AM3 519 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 TAF3Q5VWG9 929 aa2.57□□□□□ -2
CLK1-204ENST00000432425 SHQ1Q6PI26 577 aaKnown RBP2.57□□□□□ -2
CLK1-204ENST00000432425 Q71RC1 249 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 COX8CQ7Z4L0 72 aa2.57□□□□□ -2
CLK1-204ENST00000432425 C5orf24Q7Z6I8 188 aa2.57□□□□□ -2
CLK1-204ENST00000432425 IQUBQ8NA54 791 aa2.57□□□□□ -2
CLK1-204ENST00000432425 IPMKQ8NFU5 416 aa2.57□□□□□ -2
CLK1-204ENST00000432425 OR4Q3Q8NH05 313 aa2.57□□□□□ -2
CLK1-204ENST00000432425 PTP4A1Q93096 173 aa2.57□□□□□ -2
CLK1-204ENST00000432425 VPS33AQ96AX1 596 aa2.57□□□□□ -2
CLK1-204ENST00000432425 SERAC1Q96JX3 654 aa2.57□□□□□ -2
CLK1-204ENST00000432425 CCDC94Q9BW85 323 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 EDEM3Q9BZQ6 932 aa2.57□□□□□ -2
CLK1-204ENST00000432425 RPAP3Q9H6T3 665 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 YY1AP1Q9H869 796 aa2.57□□□□□ -2
CLK1-204ENST00000432425 ZWILCHQ9H900 591 aa2.57□□□□□ -2
CLK1-204ENST00000432425 SP140LQ9H930 580 aa2.57□□□□□ -2
CLK1-204ENST00000432425 ARGLU1Q9NWB6 273 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 DNAJB9Q9UBS3 223 aa2.57□□□□□ -2
CLK1-204ENST00000432425 DBF4Q9UBU7 674 aaPredicted RBP2.57□□□□□ -2
CLK1-204ENST00000432425 NCKAP1Q9Y2A7 1128 aa2.57□□□□□ -2
CLK1-204ENST00000432425 N6AMT1Q9Y5N5 214 aa2.57□□□□□ -2
CLK1-204ENST00000432425 HEG1Q9ULI3 1381 aa2.56□□□□□ -2
CLK1-204ENST00000432425 LINC00854A0A1B0GVQ3 168 aa2.56□□□□□ -2
CLK1-204ENST00000432425 A8MXE2 369 aa2.56□□□□□ -2
CLK1-204ENST00000432425 FAM25EA8MYX2 175 aa2.56□□□□□ -2
CLK1-204ENST00000432425 CCDC188H7C350 402 aa2.56□□□□□ -2
CLK1-204ENST00000432425 PGRMC2O15173 223 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TXNL1O43396 289 aa2.56□□□□□ -2
CLK1-204ENST00000432425 FMO6PO60774 539 aa2.56□□□□□ -2
CLK1-204ENST00000432425 PRDM1O75626 825 aa2.56□□□□□ -2
CLK1-204ENST00000432425 PGLSO95336 258 aa2.56□□□□□ -2
CLK1-204ENST00000432425 GUCA1CO95843 209 aa2.56□□□□□ -2
CLK1-204ENST00000432425 RENP00797 406 aa2.56□□□□□ -2
CLK1-204ENST00000432425 C9P02748 559 aa2.56□□□□□ -2
CLK1-204ENST00000432425 MT-ND1P03886 318 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TCF4P15884 667 aa2.56□□□□□ -2
CLK1-204ENST00000432425 IFNAR1P17181 557 aa2.56□□□□□ -2
CLK1-204ENST00000432425 KLK2P20151 261 aa2.56□□□□□ -2
CLK1-204ENST00000432425 ELK3P41970 407 aa2.56□□□□□ -2
CLK1-204ENST00000432425 GSK3BP49841 420 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TAZQ16635 292 aa2.56□□□□□ -2
CLK1-204ENST00000432425 LRRC37A5PQ49AS3 106 aa2.56□□□□□ -2
CLK1-204ENST00000432425 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.56□□□□□ -2
CLK1-204ENST00000432425 LEMD1Q68G75 181 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TCEAL6Q6IPX3 200 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TRAT1Q6PIZ9 186 aa2.56□□□□□ -2
CLK1-204ENST00000432425 C15orf52Q6ZUT6 534 aaKnown RBP2.56□□□□□ -2
CLK1-204ENST00000432425 ERN2Q76MJ5 926 aaKnown RBP2.56□□□□□ -2
CLK1-204ENST00000432425 PIWIL3Q7Z3Z3 882 aaKnown RBP2.56□□□□□ -2
CLK1-204ENST00000432425 ABI3BPQ7Z7G0 1075 aa2.56□□□□□ -2
CLK1-204ENST00000432425 APCDD1Q8J025 514 aa2.56□□□□□ -2
CLK1-204ENST00000432425 CD177Q8N6Q3 437 aa2.56□□□□□ -2
CLK1-204ENST00000432425 KLHL30-AS1Q8NEE0 82 aa2.56□□□□□ -2
CLK1-204ENST00000432425 ZNF75CPQ92670 426 aaPredicted RBP2.56□□□□□ -2
CLK1-204ENST00000432425 CNDP2Q96KP4 475 aaKnown RBP2.56□□□□□ -2
CLK1-204ENST00000432425 CNOT6LQ96LI5 555 aaKnown RBP2.56□□□□□ -2
CLK1-204ENST00000432425 TMEM237Q96Q45 408 aa2.56□□□□□ -2
CLK1-204ENST00000432425 GSDMAQ96QA5 445 aa2.56□□□□□ -2
CLK1-204ENST00000432425 RWDD1Q9H446 243 aaPredicted RBP2.56□□□□□ -2
CLK1-204ENST00000432425 TNFRSF19Q9NS68 423 aa2.56□□□□□ -2
CLK1-204ENST00000432425 TMOD3Q9NYL9 352 aa2.56□□□□□ -2
CLK1-204ENST00000432425 EPS15L1Q9UBC2 864 aa2.56□□□□□ -2
CLK1-204ENST00000432425 ABCD2Q9UBJ2 740 aa2.56□□□□□ -2
CLK1-204ENST00000432425 B4GALT7Q9UBV7 327 aa2.56□□□□□ -2
CLK1-204ENST00000432425 CELA1Q9UNI1 258 aa2.56□□□□□ -2
CLK1-204ENST00000432425 ATAD2BQ9ULI0 1458 aa2.55□□□□□ -2
CLK1-204ENST00000432425 IGHV3-16A0A0C4DH30 117 aa2.55□□□□□ -2
CLK1-204ENST00000432425 PRSS46E5RG02 174 aa2.55□□□□□ -2
CLK1-204ENST00000432425 K7EQG2 157 aa2.55□□□□□ -2
CLK1-204ENST00000432425 BAG2O95816 211 aa2.55□□□□□ -2
CLK1-204ENST00000432425 GZMAP12544 262 aa2.55□□□□□ -2
CLK1-204ENST00000432425 EEF2P13639 858 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 RPL9P32969 192 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 RAD23AP54725 363 aa2.55□□□□□ -2
CLK1-204ENST00000432425 RBP5P82980 135 aa2.55□□□□□ -2
CLK1-204ENST00000432425 AKAP17AQ02040 695 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 TNK1Q13470 666 aa2.55□□□□□ -2
CLK1-204ENST00000432425 RUNX3Q13761 415 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms