RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 SPSB2Q99619 263 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SLC26A1Q9H2B4 701 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SOX17Q9H6I2 414 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ZNF71Q9NQZ8 489 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PPT2Q9UMR5 302 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SLC12A4Q9UP95 1085 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PADI2Q9Y2J8 665 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 VSTM2BA6NLU5 285 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 NDUFS4O43181 175 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ALBP02768 609 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 SERPINA6P08185 405 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 PIM1P11309 404 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 PCSK2P16519 638 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 IDH3AP50213 366 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 CCL11P51671 97 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 RAP1GDS1P52306 607 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 MAT1AQ00266 395 aaKnown RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 NFATC3Q12968 1075 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 CUL3Q13618 768 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 NR6A1Q15406 480 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 VWA2Q5GFL6 755 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 TCHHL1Q5QJ38 904 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 GARNL3Q5VVW2 1013 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 PRMT9Q6P2P2 845 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 SCIMPQ6UWF3 145 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 PPP1R32Q7Z5V6 425 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 MRGPREQ86SM8 312 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 APLFQ8IW19 511 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 AMER3Q8N944 861 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ANKRD53Q8N9V6 530 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 OR9A4Q8NGU2 314 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 CEP70Q8NHQ1 597 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ZNF473Q8WTR7 871 aaKnown RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 STON2Q8WXE9 905 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 PPP1R36Q96LQ0 422 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 QRFPRQ96P65 431 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 CCDC28BQ9BUN5 200 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ING2Q9H160 280 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 ADNPQ9H2P0 1102 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 DMRT3Q9NQL9 472 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 FARSBQ9NSD9 589 aaKnown RBP13.5□□□□□ -0.25
LAMA4-208ENST00000431543 MRGBPQ9NV56 204 aa13.5□□□□□ -0.25
LAMA4-208ENST00000431543 SCN3AQ9NY46 2000 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 A0A088AWK7 358 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 MAGEB17A8MXT2 336 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SNX3O60493 162 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 DNAJB6O75190 326 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SEC22BO75396 215 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 RSL1D1O76021 490 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 B3GALT4O96024 378 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TGFB1P01137 390 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 CD63P08962 238 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 ZNF10P21506 573 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 FBLP22087 321 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 MAPK1P28482 360 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SKP1P63208 163 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 KLC1Q07866 573 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 C19orf57Q0VDD7 668 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 NDUFA9Q16795 377 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SMU1Q2TAY7 513 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 DEPDC1Q5TB30 811 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 KHDRBS2Q5VWX1 349 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 METTL21CQ5VZV1 264 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TMEM214Q6NUQ4 689 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 NIPAL1Q6NVV3 410 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 PAGE2Q7Z2X7 111 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 PTRH1Q86Y79 214 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 PDSS2Q86YH6 399 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 RFWD2Q8NHY2 731 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 ZCCHC10Q8TBK6 192 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 NT5CQ8TCD5 201 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 STT3BQ8TCJ2 826 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 RGMAQ96B86 450 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TMEM120AQ9BXJ8 343 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 ROGDIQ9GZN7 287 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 REXO4Q9GZR2 422 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 SLC25A18Q9H1K4 315 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 WDR54Q9H977 334 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 LRTM1Q9HBL6 345 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TCF7L2Q9NQB0 619 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 C1orf109Q9NX04 203 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TRPC4Q9UBN4 977 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 CDC14AQ9UNH5 594 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 EIF3LQ9Y262 564 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TMED5Q9Y3A6 229 aa13.49□□□□□ -0.25
LAMA4-208ENST00000431543 TLN1Q9Y490 2541 aaKnown RBP13.49□□□□□ -0.25
LAMA4-208ENST00000431543 GOLGA8QA0A0J9YX86 632 aa13.48□□□□□ -0.25
LAMA4-208ENST00000431543 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
LAMA4-208ENST00000431543 GOLGA8OA6NCC3 632 aa13.48□□□□□ -0.25
LAMA4-208ENST00000431543 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
LAMA4-208ENST00000431543 A6NL46 340 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms