RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 UGT2B7P16662 529 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 PPIBP23284 216 aaKnown RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 MANFP55145 182 aaKnown RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 MYBPC1Q00872 1141 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 PAQR7Q86WK9 346 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 SIX5Q8N196 739 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 KCT2Q8NC54 265 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 SLC37A2Q8TED4 501 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 KLHDC7BQ96G42 594 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 GSDMCQ9BYG8 508 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 OLAHQ9NV23 265 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 CORO2BQ9UQ03 480 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 U3KQV3 271 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 SCN2AQ99250 2005 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 CCDC88CQ9P219 2028 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 A6NHS1 94 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 PDPK1O15530 556 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 PRSS23O95084 383 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 CLIC3O95833 236 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 FESP07332 822 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 FAM58BPP0C7Q3 252 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 CERS1P27544 350 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 PTGER1P34995 402 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 AHRP35869 848 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 RPS9P46781 194 aaKnown RBP15.84■□□□□ 0.13
USHBP1-203ENST00000431146 CRYBA2P53672 197 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 RPS26P62854 115 aaKnown RBP15.84■□□□□ 0.13
USHBP1-203ENST00000431146 SLAMF1Q13291 335 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 NDUFAF5Q5TEU4 345 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 OR52E8Q6IFG1 317 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 ABHD17CQ6PCB6 329 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 STK32CQ86UX6 486 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 MFSD9Q8NBP5 474 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 TPD52L3Q96J77 140 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 PRDM7Q9NQW5 492 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 DNAJB9Q9UBS3 223 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF639Q9UID6 485 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 ADAM29Q9UKF5 820 aa15.84■□□□□ 0.13
USHBP1-203ENST00000431146 SAMD4AQ9UPU9 718 aaKnown RBP15.84■□□□□ 0.13
USHBP1-203ENST00000431146 A0A1W2PPC1 479 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 hCG_2039718K7EN88 272 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 DIRAS1O95057 198 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 SNAP29O95721 258 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ADPRMQ3LIE5 342 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 TMEM35AQ53FP2 167 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ANKRD34AQ69YU3 496 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 VN1R4Q7Z5H5 301 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 TMEM179BQ7Z7N9 219 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ZDHHC21Q8IVQ6 265 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 TBC1D19Q8N5T2 526 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ACOT4Q8N9L9 421 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 MFSD2AQ8NA29 543 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 OR52N2Q8NGI0 321 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 CYGBQ8WWM9 190 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 TFAP2CQ92754 450 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 TRAPPC9Q96Q05 1148 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 MAGIXQ9H6Y5 334 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ACTR10Q9NZ32 417 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 FBXW2Q9UKT8 454 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 ABCG2Q9UNQ0 655 aa15.83■□□□□ 0.13
USHBP1-203ENST00000431146 A0A1B0GTW7 788 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 TOR1BO14657 336 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 CTSVO60911 334 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 ZNF217O75362 1048 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 TNFRSF21O75509 655 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 GCM2O75603 506 aaPredicted RBP15.83■□□□□ 0.12
USHBP1-203ENST00000431146 FKBP9O95302 570 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 OPN1SWP03999 348 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 PVRP15151 417 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 HIST1H1TP22492 207 aaPredicted RBP15.83■□□□□ 0.12
USHBP1-203ENST00000431146 ATP5A1P25705 553 aaKnown RBP15.83■□□□□ 0.12
USHBP1-203ENST00000431146 FKBP9P1Q75LS8 142 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 CARM1Q86X55 608 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 C11orf65Q8NCR3 313 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 OR2L5Q8NG80 312 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 NFKBIDQ8NI38 313 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 SLC22A18Q96BI1 424 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 HSH2DQ96JZ2 352 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 KCNC2Q96PR1 638 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 ADI1Q9BV57 179 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 SARGQ9BW04 601 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 PRDM6Q9NQX0 595 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 GPR27Q9NS67 375 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 MRPS17Q9Y2R5 130 aaKnown RBP15.83■□□□□ 0.12
USHBP1-203ENST00000431146 ATG4BQ9Y4P1 393 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 GMEB1Q9Y692 573 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 MUC3AQ02505 3323 aa15.83■□□□□ 0.12
USHBP1-203ENST00000431146 A0A0J9YVX5 310 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 STK25O00506 426 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 MAP3K13O43283 966 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 NDUFS2O75306 463 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 WNT1P04628 370 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 JUNDP17535 347 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 CDK9P50750 372 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PCBP4P57723 403 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PPP1CAP62136 330 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 UBE2IP63279 158 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 TXNL4AP83876 142 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 MERTKQ12866 999 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 VEZF1Q14119 521 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms