RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 MEOX1P50221 254 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 CLCN2P51788 898 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 XKR6Q5GH73 641 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 UBAP2Q5T6F2 1119 aaKnown RBP15.15■□□□□ 0.02
PTPRA-206ENST00000430705 SULF2Q8IWU5 870 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ZNF595Q8IYB9 648 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ZNF321PQ8N8H1 164 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ARMC2Q8NEN0 867 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 FBXO25Q8TCJ0 367 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 CDKL2Q92772 493 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 VMP1Q96GC9 406 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 SERINC2Q96SA4 455 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ATOH8Q96SQ7 321 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 MS4A8Q9BY19 250 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ALG9Q9H6U8 611 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 LIN28AQ9H9Z2 209 aaKnown RBP15.15■□□□□ 0.02
PTPRA-206ENST00000430705 ADAP2Q9NPF8 381 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 IGSF5Q9NSI5 407 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 DEPPQ9NTK1 212 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 CD274Q9NZQ7 290 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 KCMF1Q9P0J7 381 aa15.15■□□□□ 0.02
PTPRA-206ENST00000430705 A0A0G2JMM0 328 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 A0A1W2PPB8 328 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 A0A1W2PRS3 328 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 ANKDD1BA6NHY2 528 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 KIR3DP1A8MWS1 328 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 RTCAO00442 366 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CLGNO14967 610 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 MTTPP55157 894 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 ILF2Q12905 390 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 SLC13A2Q13183 592 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CHIT1Q13231 466 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 MTFR2Q6P444 385 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 TRIM40Q6P9F5 258 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 C3P1Q6ZMU1 363 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 C3orf62Q6ZUJ4 267 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 LRRC70Q7Z2Q7 622 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 ISCA2Q86U28 154 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 DOLPP1Q86YN1 238 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CYP4Z2PQ8N1L4 340 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 GHDCQ8N2G8 530 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 RNF175Q8N4F7 328 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 FAM98AQ8NCA5 519 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 ZNF473Q8WTR7 871 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 PTPMT1Q8WUK0 201 aaPredicted RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 UBTD2Q8WUN7 234 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 SREK1Q8WXA9 508 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 DMRTA2Q96SC8 542 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 MAPKAP1Q9BPZ7 522 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 EFCAB11Q9BUY7 163 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CAPS2Q9BXY5 557 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CD244Q9BZW8 370 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 PHACTR1Q9C0D0 580 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 CNOT10Q9H9A5 744 aaKnown RBP15.14■□□□□ 0.01
PTPRA-206ENST00000430705 FBXW2Q9UKT8 454 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 RNF112Q9ULX5 631 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 HRH3Q9Y5N1 445 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 PCNX1Q96RV3 2341 aa15.14■□□□□ 0.01
PTPRA-206ENST00000430705 HMX2A2RU54 273 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 PINLYPA6NC86 204 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 UBXN8O00124 270 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 FCHO1O14526 889 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CCNT2O60583 730 aaKnown RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 ZNF354AO60765 605 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 SCELO95171 688 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 GSTA2P09210 222 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 MTHFD2P13995 350 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CASP2P42575 452 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 PLTPP55058 493 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 GPR85P60893 370 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 IRF9Q00978 393 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 GUCY2DQ02846 1103 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 ELAVL1Q15717 326 aaKnown RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 TBCCQ15814 346 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CMPK2Q5EBM0 449 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CTAGE3PQ8IX95 158 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CENPLQ8N0S6 344 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 PPM1NQ8N819 430 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 FBF1Q8TES7 1133 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 SORBS1Q9BX66 1292 aaKnown RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 TRIM8Q9BZR9 551 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 NUDT4Q9NZJ9 180 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 TXNDC16Q9P2K2 825 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 KLF13Q9Y2Y9 288 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-206ENST00000430705 CACNA1CQ13936 2221 aa15.13■□□□□ 0.01
PTPRA-206ENST00000430705 PEX1O43933 1283 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 HS6ST1O60243 411 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 KERAO60938 352 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 LDB3O75112 727 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 SH3BGRLO75368 114 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 OR2J2O76002 312 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 OR6B1O95007 311 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 MLYCDO95822 493 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 SNRPB2P08579 225 aaKnown RBP15.12■□□□□ 0.01
PTPRA-206ENST00000430705 AGAP20933 346 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 ATP5A1P25705 553 aaKnown RBP15.12■□□□□ 0.01
PTPRA-206ENST00000430705 MSH2P43246 934 aa15.12■□□□□ 0.01
PTPRA-206ENST00000430705 MAGEA4P43358 317 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms